Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.61■■□□□ 1.21
COL4A2P08572 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
COL4A2P08572 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL4A2P08572 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
COL4A2P08572 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.61■■□□□ 1.21
COL4A2P08572 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL4A2P08572 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL4A2P08572 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.61■■□□□ 1.21
COL4A2P08572 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL4A2P08572 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL4A2P08572 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.6■■□□□ 1.21
COL4A2P08572 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.6■■□□□ 1.21
COL4A2P08572 CROCCP5-201ENST00000436658 830 ntBASIC22.6■■□□□ 1.21
COL4A2P08572 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.6■■□□□ 1.21
COL4A2P08572 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.6■■□□□ 1.21
COL4A2P08572 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
COL4A2P08572 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL4A2P08572 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL4A2P08572 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.6■■□□□ 1.21
COL4A2P08572 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL4A2P08572 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.6■■□□□ 1.21
COL4A2P08572 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.6■■□□□ 1.21
COL4A2P08572 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL4A2P08572 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL4A2P08572 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL4A2P08572 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL4A2P08572 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL4A2P08572 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL4A2P08572 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL4A2P08572 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
COL4A2P08572 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.59■■□□□ 1.21
COL4A2P08572 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL4A2P08572 AC138932.3-201ENST00000567634 1902 ntBASIC22.59■■□□□ 1.21
COL4A2P08572 ABHD17AP1-201ENST00000358206 933 ntBASIC22.59■■□□□ 1.21
COL4A2P08572 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.59■■□□□ 1.21
COL4A2P08572 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.59■■□□□ 1.21
COL4A2P08572 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.59■■□□□ 1.21
COL4A2P08572 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.59■■□□□ 1.21
COL4A2P08572 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL4A2P08572 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
COL4A2P08572 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
COL4A2P08572 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.58■■□□□ 1.21
COL4A2P08572 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.58■■□□□ 1.21
COL4A2P08572 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.58■■□□□ 1.21
COL4A2P08572 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL4A2P08572 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
COL4A2P08572 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.58■■□□□ 1.2
COL4A2P08572 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A2P08572 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
COL4A2P08572 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A2P08572 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A2P08572 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A2P08572 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A2P08572 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A2P08572 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.57■■□□□ 1.2
COL4A2P08572 BID-214ENST00000617586 542 ntTSL 5 BASIC22.57■■□□□ 1.2
COL4A2P08572 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL4A2P08572 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.56■■□□□ 1.2
COL4A2P08572 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.56■■□□□ 1.2
COL4A2P08572 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL4A2P08572 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL4A2P08572 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.56■■□□□ 1.2
COL4A2P08572 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL4A2P08572 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.56■■□□□ 1.2
COL4A2P08572 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.56■■□□□ 1.2
COL4A2P08572 SMUG1P1-201ENST00000590640 811 ntBASIC22.56■■□□□ 1.2
COL4A2P08572 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
COL4A2P08572 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.56■■□□□ 1.2
COL4A2P08572 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
COL4A2P08572 AC004687.1-201ENST00000579003 1625 ntBASIC22.55■■□□□ 1.2
COL4A2P08572 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A2P08572 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A2P08572 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A2P08572 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.55■■□□□ 1.2
COL4A2P08572 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.55■■□□□ 1.2
COL4A2P08572 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.55■■□□□ 1.2
COL4A2P08572 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.55■■□□□ 1.2
COL4A2P08572 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A2P08572 BX005040.4-201ENST00000637145 1518 ntBASIC22.55■■□□□ 1.2
COL4A2P08572 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A2P08572 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A2P08572 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL4A2P08572 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A2P08572 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.54■■□□□ 1.2
COL4A2P08572 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A2P08572 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A2P08572 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A2P08572 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A2P08572 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A2P08572 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A2P08572 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL4A2P08572 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.54■■□□□ 1.2
COL4A2P08572 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.54■■□□□ 1.2
COL4A2P08572 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.54■■□□□ 1.2
COL4A2P08572 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.53■■□□□ 1.2
COL4A2P08572 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A2P08572 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A2P08572 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL4A2P08572 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
COL4A2P08572 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms