Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.32■□□□□ 0.36
TRGV3P03979 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV3P03979 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.32■□□□□ 0.36
TRGV3P03979 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV3P03979 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV3P03979 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV3P03979 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV3P03979 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.32■□□□□ 0.36
TRGV3P03979 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV3P03979 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRGV3P03979 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV3P03979 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV3P03979 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TRGV3P03979 SERBP1P1-201ENST00000396021 1160 ntBASIC17.31■□□□□ 0.36
TRGV3P03979 AC096631.2-201ENST00000436136 790 ntBASIC17.31■□□□□ 0.36
TRGV3P03979 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
TRGV3P03979 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV3P03979 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.31■□□□□ 0.36
TRGV3P03979 MIR3181-201ENST00000578512 73 ntBASIC17.31■□□□□ 0.36
TRGV3P03979 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.31■□□□□ 0.36
TRGV3P03979 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.31■□□□□ 0.36
TRGV3P03979 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.31■□□□□ 0.36
TRGV3P03979 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV3P03979 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV3P03979 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.31■□□□□ 0.36
TRGV3P03979 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV3P03979 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV3P03979 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV3P03979 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.3■□□□□ 0.36
TRGV3P03979 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRGV3P03979 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TRGV3P03979 UNC93B3-201ENST00000308076 687 ntBASIC17.3■□□□□ 0.36
TRGV3P03979 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV3P03979 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV3P03979 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV3P03979 AL499627.2-201ENST00000606283 725 ntBASIC17.3■□□□□ 0.36
TRGV3P03979 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRGV3P03979 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.3■□□□□ 0.36
TRGV3P03979 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV3P03979 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV3P03979 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV3P03979 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV3P03979 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV3P03979 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV3P03979 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV3P03979 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRGV3P03979 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV3P03979 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV3P03979 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV3P03979 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV3P03979 AL138724.1-201ENST00000606771 1088 ntBASIC17.29■□□□□ 0.36
TRGV3P03979 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRGV3P03979 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV3P03979 AC012676.1-201ENST00000574705 1949 ntBASIC17.29■□□□□ 0.36
TRGV3P03979 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV3P03979 AC068473.5-201ENST00000616428 2072 ntBASIC17.28■□□□□ 0.36
TRGV3P03979 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV3P03979 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV3P03979 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRGV3P03979 AC133637.1-201ENST00000624115 1537 ntBASIC17.28■□□□□ 0.36
TRGV3P03979 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV3P03979 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV3P03979 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRGV3P03979 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV3P03979 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.28■□□□□ 0.36
TRGV3P03979 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.28■□□□□ 0.36
TRGV3P03979 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.28■□□□□ 0.36
TRGV3P03979 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRGV3P03979 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV3P03979 AL136162.1-201ENST00000607711 1078 ntBASIC17.28■□□□□ 0.36
TRGV3P03979 PKD1P6-201ENST00000343738 4769 ntBASIC17.28■□□□□ 0.36
TRGV3P03979 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV3P03979 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV3P03979 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV3P03979 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV3P03979 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRGV3P03979 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TRGV3P03979 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV3P03979 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV3P03979 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
TRGV3P03979 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV3P03979 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRGV3P03979 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.27■□□□□ 0.36
TRGV3P03979 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.27■□□□□ 0.36
TRGV3P03979 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TRGV3P03979 AC011298.3-201ENST00000615796 283 ntBASIC17.27■□□□□ 0.36
TRGV3P03979 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.27■□□□□ 0.36
TRGV3P03979 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV3P03979 AC004687.1-201ENST00000579003 1625 ntBASIC17.27■□□□□ 0.36
TRGV3P03979 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV3P03979 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV3P03979 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV3P03979 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRGV3P03979 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV3P03979 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV3P03979 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.26■□□□□ 0.35
TRGV3P03979 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRGV3P03979 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
TRGV3P03979 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV3P03979 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms