Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRBC1P01850 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRBC1P01850 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRBC1P01850 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
TRBC1P01850 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
TRBC1P01850 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
TRBC1P01850 AC005837.3-201ENST00000612163 286 ntBASIC22.14■■□□□ 1.13
TRBC1P01850 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.14■■□□□ 1.13
TRBC1P01850 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.13■■□□□ 1.13
TRBC1P01850 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRBC1P01850 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRBC1P01850 BX842568.3-201ENST00000418104 571 ntBASIC22.13■■□□□ 1.13
TRBC1P01850 SLC47A1P1-202ENST00000449666 945 ntBASIC22.13■■□□□ 1.13
TRBC1P01850 SUDS3P1-201ENST00000505831 966 ntBASIC22.13■■□□□ 1.13
TRBC1P01850 AP001330.3-201ENST00000520123 633 ntBASIC22.13■■□□□ 1.13
TRBC1P01850 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
TRBC1P01850 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.13■■□□□ 1.13
TRBC1P01850 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TRBC1P01850 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
TRBC1P01850 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.13■■□□□ 1.13
TRBC1P01850 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRBC1P01850 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.13■■□□□ 1.13
TRBC1P01850 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRBC1P01850 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRBC1P01850 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRBC1P01850 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRBC1P01850 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.12■■□□□ 1.13
TRBC1P01850 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
TRBC1P01850 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.12■■□□□ 1.13
TRBC1P01850 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.12■■□□□ 1.13
TRBC1P01850 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.12■■□□□ 1.13
TRBC1P01850 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRBC1P01850 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRBC1P01850 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.12■■□□□ 1.13
TRBC1P01850 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.12■■□□□ 1.13
TRBC1P01850 AC010525.1-201ENST00000585559 441 ntBASIC22.12■■□□□ 1.13
TRBC1P01850 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRBC1P01850 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.12■■□□□ 1.13
TRBC1P01850 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.12■■□□□ 1.13
TRBC1P01850 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
TRBC1P01850 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
TRBC1P01850 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.11■■□□□ 1.13
TRBC1P01850 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRBC1P01850 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.11■■□□□ 1.13
TRBC1P01850 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRBC1P01850 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.11■■□□□ 1.13
TRBC1P01850 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.11■■□□□ 1.13
TRBC1P01850 MIR939-201ENST00000401314 82 ntBASIC22.11■■□□□ 1.13
TRBC1P01850 AC233992.3-201ENST00000607491 485 ntBASIC22.11■■□□□ 1.13
TRBC1P01850 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
TRBC1P01850 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
TRBC1P01850 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRBC1P01850 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
TRBC1P01850 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.11■■□□□ 1.13
TRBC1P01850 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRBC1P01850 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRBC1P01850 C9orf163-202ENST00000624034 2573 ntBASIC22.1■■□□□ 1.13
TRBC1P01850 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
TRBC1P01850 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRBC1P01850 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
TRBC1P01850 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRBC1P01850 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
TRBC1P01850 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
TRBC1P01850 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRBC1P01850 AF213884.3-201ENST00000563833 479 ntBASIC22.1■■□□□ 1.13
TRBC1P01850 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRBC1P01850 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.1■■□□□ 1.13
TRBC1P01850 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRBC1P01850 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRBC1P01850 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
TRBC1P01850 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRBC1P01850 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
TRBC1P01850 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
TRBC1P01850 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.09■■□□□ 1.13
TRBC1P01850 AC027682.1-201ENST00000562846 899 ntBASIC22.09■■□□□ 1.13
TRBC1P01850 AC008764.7-201ENST00000593779 1081 ntBASIC22.09■■□□□ 1.13
TRBC1P01850 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRBC1P01850 AL136967.2-201ENST00000623968 743 ntBASIC22.09■■□□□ 1.13
TRBC1P01850 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.09■■□□□ 1.13
TRBC1P01850 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRBC1P01850 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRBC1P01850 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRBC1P01850 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
TRBC1P01850 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.08■■□□□ 1.13
TRBC1P01850 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.08■■□□□ 1.13
TRBC1P01850 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRBC1P01850 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRBC1P01850 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
TRBC1P01850 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRBC1P01850 AC142381.2-201ENST00000566120 298 ntBASIC22.08■■□□□ 1.13
TRBC1P01850 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.08■■□□□ 1.13
TRBC1P01850 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRBC1P01850 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.13
TRBC1P01850 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRBC1P01850 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TRBC1P01850 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.08■■□□□ 1.12
TRBC1P01850 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRBC1P01850 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.07■■□□□ 1.12
TRBC1P01850 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.07■■□□□ 1.12
TRBC1P01850 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms