Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TGFAP01135 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TGFAP01135 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
TGFAP01135 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TGFAP01135 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFAP01135 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.2■□□□□ 0.5
TGFAP01135 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFAP01135 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFAP01135 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TGFAP01135 AC138932.3-201ENST00000567634 1902 ntBASIC18.2■□□□□ 0.5
TGFAP01135 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TGFAP01135 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFAP01135 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.2■□□□□ 0.5
TGFAP01135 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.2■□□□□ 0.5
TGFAP01135 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFAP01135 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFAP01135 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFAP01135 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFAP01135 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TGFAP01135 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.19■□□□□ 0.5
TGFAP01135 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TGFAP01135 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.19■□□□□ 0.5
TGFAP01135 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFAP01135 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.19■□□□□ 0.5
TGFAP01135 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFAP01135 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TGFAP01135 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.19■□□□□ 0.5
TGFAP01135 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TGFAP01135 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TGFAP01135 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TGFAP01135 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TGFAP01135 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TGFAP01135 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TGFAP01135 AC142381.3-201ENST00000568208 1670 ntBASIC18.18■□□□□ 0.5
TGFAP01135 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.18■□□□□ 0.5
TGFAP01135 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFAP01135 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.18■□□□□ 0.5
TGFAP01135 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.18■□□□□ 0.5
TGFAP01135 AC137761.2-201ENST00000561729 223 ntBASIC18.18■□□□□ 0.5
TGFAP01135 AC145350.3-201ENST00000569033 163 ntBASIC18.18■□□□□ 0.5
TGFAP01135 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.18■□□□□ 0.5
TGFAP01135 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.18■□□□□ 0.5
TGFAP01135 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TGFAP01135 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TGFAP01135 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFAP01135 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFAP01135 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TGFAP01135 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TGFAP01135 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
TGFAP01135 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TGFAP01135 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.17■□□□□ 0.5
TGFAP01135 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.17■□□□□ 0.5
TGFAP01135 AC080038.1-201ENST00000611274 1154 ntBASIC18.17■□□□□ 0.5
TGFAP01135 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.17■□□□□ 0.5
TGFAP01135 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TGFAP01135 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TGFAP01135 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TGFAP01135 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.16■□□□□ 0.5
TGFAP01135 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TGFAP01135 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TGFAP01135 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TGFAP01135 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TGFAP01135 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.16■□□□□ 0.5
TGFAP01135 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.16■□□□□ 0.5
TGFAP01135 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TGFAP01135 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TGFAP01135 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TGFAP01135 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TGFAP01135 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.16■□□□□ 0.5
TGFAP01135 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.16■□□□□ 0.5
TGFAP01135 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.16■□□□□ 0.5
TGFAP01135 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.16■□□□□ 0.5
TGFAP01135 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.16■□□□□ 0.5
TGFAP01135 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TGFAP01135 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TGFAP01135 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TGFAP01135 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TGFAP01135 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TGFAP01135 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TGFAP01135 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.15■□□□□ 0.5
TGFAP01135 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TGFAP01135 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TGFAP01135 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TGFAP01135 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.15■□□□□ 0.5
TGFAP01135 HLA-L-209ENST00000420110 1011 ntBASIC18.15■□□□□ 0.5
TGFAP01135 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.15■□□□□ 0.5
TGFAP01135 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TGFAP01135 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.15■□□□□ 0.5
TGFAP01135 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.15■□□□□ 0.5
TGFAP01135 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TGFAP01135 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.15■□□□□ 0.5
TGFAP01135 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TGFAP01135 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TGFAP01135 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.14■□□□□ 0.5
TGFAP01135 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TGFAP01135 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TGFAP01135 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.14■□□□□ 0.49
TGFAP01135 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TGFAP01135 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.14■□□□□ 0.49
TGFAP01135 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms