Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNCGO76070 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SNCGO76070 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCGO76070 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCGO76070 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCGO76070 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNCGO76070 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SNCGO76070 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCGO76070 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC14.9□□□□□ -0.02
SNCGO76070 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
SNCGO76070 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCGO76070 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCGO76070 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCGO76070 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNCGO76070 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCGO76070 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SNCGO76070 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SNCGO76070 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SNCGO76070 AL391121.1-201ENST00000607967 1349 ntBASIC14.9□□□□□ -0.02
SNCGO76070 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SNCGO76070 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SNCGO76070 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC14.89□□□□□ -0.03
SNCGO76070 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC14.89□□□□□ -0.03
SNCGO76070 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SNCGO76070 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SNCGO76070 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SNCGO76070 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNCGO76070 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SNCGO76070 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.88□□□□□ -0.03
SNCGO76070 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SNCGO76070 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC14.88□□□□□ -0.03
SNCGO76070 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.88□□□□□ -0.03
SNCGO76070 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC14.88□□□□□ -0.03
SNCGO76070 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SNCGO76070 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNCGO76070 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SNCGO76070 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SNCGO76070 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC14.87□□□□□ -0.03
SNCGO76070 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SNCGO76070 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.87□□□□□ -0.03
SNCGO76070 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.87□□□□□ -0.03
SNCGO76070 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SNCGO76070 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC14.87□□□□□ -0.03
SNCGO76070 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SNCGO76070 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SNCGO76070 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC14.87□□□□□ -0.03
SNCGO76070 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SNCGO76070 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SNCGO76070 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNCGO76070 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.86□□□□□ -0.03
SNCGO76070 SLC6A10P-202ENST00000431994 2058 ntBASIC14.86□□□□□ -0.03
SNCGO76070 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCGO76070 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCGO76070 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCGO76070 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNCGO76070 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SNCGO76070 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCGO76070 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCGO76070 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCGO76070 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCGO76070 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.86□□□□□ -0.03
SNCGO76070 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCGO76070 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCGO76070 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNCGO76070 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms