Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.79■□□□□ 0.6
TSPAN9O75954 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.79■□□□□ 0.6
TSPAN9O75954 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN9O75954 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN9O75954 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN9O75954 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.79■□□□□ 0.6
TSPAN9O75954 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.79■□□□□ 0.6
TSPAN9O75954 AC022211.4-201ENST00000625094 2161 ntBASIC18.79■□□□□ 0.6
TSPAN9O75954 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TSPAN9O75954 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN9O75954 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN9O75954 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.78■□□□□ 0.6
TSPAN9O75954 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TSPAN9O75954 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN9O75954 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TSPAN9O75954 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN9O75954 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN9O75954 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.78■□□□□ 0.6
TSPAN9O75954 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN9O75954 UNC93B8-201ENST00000511903 705 ntBASIC18.78■□□□□ 0.6
TSPAN9O75954 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN9O75954 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN9O75954 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN9O75954 FOXO3B-201ENST00000395675 1928 ntBASIC18.78■□□□□ 0.6
TSPAN9O75954 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.77■□□□□ 0.6
TSPAN9O75954 AC138932.3-201ENST00000567634 1902 ntBASIC18.77■□□□□ 0.6
TSPAN9O75954 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN9O75954 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.77■□□□□ 0.6
TSPAN9O75954 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.77■□□□□ 0.6
TSPAN9O75954 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.77■□□□□ 0.6
TSPAN9O75954 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.77■□□□□ 0.6
TSPAN9O75954 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TSPAN9O75954 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.77■□□□□ 0.6
TSPAN9O75954 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN9O75954 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
TSPAN9O75954 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TSPAN9O75954 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.77■□□□□ 0.59
TSPAN9O75954 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TSPAN9O75954 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TSPAN9O75954 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN9O75954 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN9O75954 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN9O75954 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN9O75954 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.76■□□□□ 0.59
TSPAN9O75954 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TSPAN9O75954 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN9O75954 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.76■□□□□ 0.59
TSPAN9O75954 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN9O75954 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TSPAN9O75954 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN9O75954 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.76■□□□□ 0.59
TSPAN9O75954 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.76■□□□□ 0.59
TSPAN9O75954 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN9O75954 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN9O75954 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN9O75954 AC233723.2-201ENST00000623798 2106 ntBASIC18.76■□□□□ 0.59
TSPAN9O75954 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN9O75954 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 KRT16P3-201ENST00000439127 1283 ntBASIC18.75■□□□□ 0.59
TSPAN9O75954 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.75■□□□□ 0.59
TSPAN9O75954 MIR4281-201ENST00000580852 62 ntBASIC18.75■□□□□ 0.59
TSPAN9O75954 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.75■□□□□ 0.59
TSPAN9O75954 AC011551.1-201ENST00000614101 683 ntBASIC18.75■□□□□ 0.59
TSPAN9O75954 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
TSPAN9O75954 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TSPAN9O75954 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN9O75954 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN9O75954 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.74■□□□□ 0.59
TSPAN9O75954 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.74■□□□□ 0.59
TSPAN9O75954 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN9O75954 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN9O75954 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
TSPAN9O75954 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
TSPAN9O75954 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.74■□□□□ 0.59
TSPAN9O75954 AC092028.1-203ENST00000608262 953 ntBASIC18.74■□□□□ 0.59
TSPAN9O75954 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.74■□□□□ 0.59
TSPAN9O75954 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.74■□□□□ 0.59
TSPAN9O75954 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN9O75954 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.73■□□□□ 0.59
TSPAN9O75954 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN9O75954 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.73■□□□□ 0.59
TSPAN9O75954 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN9O75954 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TSPAN9O75954 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN9O75954 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
TSPAN9O75954 AC008406.3-201ENST00000620001 1374 ntBASIC18.73■□□□□ 0.59
TSPAN9O75954 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.73■□□□□ 0.59
TSPAN9O75954 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TSPAN9O75954 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms