Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT3O75175 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT3O75175 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.22■□□□□ 0.99
CNOT3O75175 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT3O75175 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.22■□□□□ 0.99
CNOT3O75175 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT3O75175 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
CNOT3O75175 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT3O75175 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CNOT3O75175 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT3O75175 AC004812.2-201ENST00000611079 2094 ntBASIC21.21■□□□□ 0.99
CNOT3O75175 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.21■□□□□ 0.99
CNOT3O75175 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.21■□□□□ 0.99
CNOT3O75175 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.21■□□□□ 0.99
CNOT3O75175 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.21■□□□□ 0.99
CNOT3O75175 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.21■□□□□ 0.99
CNOT3O75175 AL138724.1-201ENST00000606771 1088 ntBASIC21.21■□□□□ 0.99
CNOT3O75175 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CNOT3O75175 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT3O75175 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT3O75175 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CNOT3O75175 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CNOT3O75175 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.2■□□□□ 0.98
CNOT3O75175 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.2■□□□□ 0.98
CNOT3O75175 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.2■□□□□ 0.98
CNOT3O75175 MIR3181-201ENST00000578512 73 ntBASIC21.2■□□□□ 0.98
CNOT3O75175 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT3O75175 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.2■□□□□ 0.98
CNOT3O75175 AC105265.2-201ENST00000467189 838 ntBASIC21.19■□□□□ 0.98
CNOT3O75175 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CNOT3O75175 SLC25A24-204ENST00000569674 2357 ntBASIC21.19■□□□□ 0.98
CNOT3O75175 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.19■□□□□ 0.98
CNOT3O75175 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT3O75175 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.19■□□□□ 0.98
CNOT3O75175 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.18■□□□□ 0.98
CNOT3O75175 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.18■□□□□ 0.98
CNOT3O75175 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CNOT3O75175 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.18■□□□□ 0.98
CNOT3O75175 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.18■□□□□ 0.98
CNOT3O75175 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CNOT3O75175 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT3O75175 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT3O75175 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT3O75175 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CNOT3O75175 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CNOT3O75175 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.17■□□□□ 0.98
CNOT3O75175 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.17■□□□□ 0.98
CNOT3O75175 AC136469.2-201ENST00000623944 1028 ntBASIC21.17■□□□□ 0.98
CNOT3O75175 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.17■□□□□ 0.98
CNOT3O75175 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.17■□□□□ 0.98
CNOT3O75175 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CNOT3O75175 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT3O75175 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT3O75175 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CNOT3O75175 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.17■□□□□ 0.98
CNOT3O75175 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT3O75175 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT3O75175 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CNOT3O75175 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.17■□□□□ 0.98
CNOT3O75175 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT3O75175 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT3O75175 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CNOT3O75175 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.16■□□□□ 0.98
CNOT3O75175 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT3O75175 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.16■□□□□ 0.98
CNOT3O75175 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.16■□□□□ 0.98
CNOT3O75175 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT3O75175 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.16■□□□□ 0.98
CNOT3O75175 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CNOT3O75175 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.15■□□□□ 0.98
CNOT3O75175 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CNOT3O75175 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CNOT3O75175 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.15■□□□□ 0.98
CNOT3O75175 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms