Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.83■■□□□ 1.09
GFRA3O60609 LINC01023-201ENST00000606054 436 ntBASIC21.83■■□□□ 1.09
GFRA3O60609 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.83■■□□□ 1.09
GFRA3O60609 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.83■■□□□ 1.09
GFRA3O60609 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.83■■□□□ 1.08
GFRA3O60609 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.83■■□□□ 1.08
GFRA3O60609 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
GFRA3O60609 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
GFRA3O60609 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GFRA3O60609 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
GFRA3O60609 MIPEPP3-201ENST00000412105 444 ntBASIC21.82■■□□□ 1.08
GFRA3O60609 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.82■■□□□ 1.08
GFRA3O60609 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
GFRA3O60609 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GFRA3O60609 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GFRA3O60609 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.81■■□□□ 1.08
GFRA3O60609 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GFRA3O60609 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GFRA3O60609 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GFRA3O60609 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.81■■□□□ 1.08
GFRA3O60609 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.81■■□□□ 1.08
GFRA3O60609 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
GFRA3O60609 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.81■■□□□ 1.08
GFRA3O60609 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
GFRA3O60609 REXO1L12P-201ENST00000622156 912 ntBASIC21.81■■□□□ 1.08
GFRA3O60609 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.81■■□□□ 1.08
GFRA3O60609 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.81■■□□□ 1.08
GFRA3O60609 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.81■■□□□ 1.08
GFRA3O60609 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.81■■□□□ 1.08
GFRA3O60609 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
GFRA3O60609 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GFRA3O60609 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GFRA3O60609 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
GFRA3O60609 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.8■■□□□ 1.08
GFRA3O60609 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
GFRA3O60609 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
GFRA3O60609 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.8■■□□□ 1.08
GFRA3O60609 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.8■■□□□ 1.08
GFRA3O60609 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.8■■□□□ 1.08
GFRA3O60609 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.8■■□□□ 1.08
GFRA3O60609 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GFRA3O60609 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
GFRA3O60609 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.8■■□□□ 1.08
GFRA3O60609 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GFRA3O60609 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
GFRA3O60609 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
GFRA3O60609 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
GFRA3O60609 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
GFRA3O60609 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
GFRA3O60609 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
GFRA3O60609 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GFRA3O60609 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
GFRA3O60609 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
GFRA3O60609 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
GFRA3O60609 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.78■■□□□ 1.08
GFRA3O60609 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.78■■□□□ 1.08
GFRA3O60609 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
GFRA3O60609 CNN2P6-201ENST00000439038 900 ntBASIC21.78■■□□□ 1.08
GFRA3O60609 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.78■■□□□ 1.08
GFRA3O60609 AC104187.1-201ENST00000607510 612 ntBASIC21.78■■□□□ 1.08
GFRA3O60609 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.78■■□□□ 1.08
GFRA3O60609 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.78■■□□□ 1.08
GFRA3O60609 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GFRA3O60609 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.77■■□□□ 1.08
GFRA3O60609 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.77■■□□□ 1.08
GFRA3O60609 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GFRA3O60609 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.77■■□□□ 1.08
GFRA3O60609 MIR718-201ENST00000390190 70 ntBASIC21.77■■□□□ 1.08
GFRA3O60609 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
GFRA3O60609 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.77■■□□□ 1.08
GFRA3O60609 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.77■■□□□ 1.08
GFRA3O60609 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
GFRA3O60609 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.77■■□□□ 1.08
GFRA3O60609 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.77■■□□□ 1.08
GFRA3O60609 MYCNOS-205ENST00000641950 531 ntBASIC21.77■■□□□ 1.08
GFRA3O60609 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
GFRA3O60609 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
GFRA3O60609 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GFRA3O60609 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GFRA3O60609 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GFRA3O60609 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
GFRA3O60609 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
GFRA3O60609 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.76■■□□□ 1.07
GFRA3O60609 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.76■■□□□ 1.07
GFRA3O60609 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.76■■□□□ 1.07
GFRA3O60609 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
GFRA3O60609 UBE2SP1-201ENST00000450587 669 ntBASIC21.76■■□□□ 1.07
GFRA3O60609 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.76■■□□□ 1.07
GFRA3O60609 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms