Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGA12O60330 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHGA12O60330 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PCDHGA12O60330 ID1-201ENST00000376105 1233 ntBASIC21.87■■□□□ 1.09
PCDHGA12O60330 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGA12O60330 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGA12O60330 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PCDHGA12O60330 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA12O60330 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGA12O60330 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA12O60330 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA12O60330 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA12O60330 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA12O60330 FP325331.1-202ENST00000623531 1380 ntBASIC21.87■■□□□ 1.09
PCDHGA12O60330 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
PCDHGA12O60330 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHGA12O60330 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA12O60330 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA12O60330 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
PCDHGA12O60330 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHGA12O60330 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA12O60330 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA12O60330 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.86■■□□□ 1.09
PCDHGA12O60330 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA12O60330 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.86■■□□□ 1.09
PCDHGA12O60330 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGA12O60330 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHGA12O60330 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PCDHGA12O60330 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGA12O60330 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA12O60330 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGA12O60330 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA12O60330 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA12O60330 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA12O60330 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHGA12O60330 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA12O60330 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGA12O60330 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA12O60330 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGA12O60330 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHGA12O60330 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA12O60330 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHGA12O60330 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA12O60330 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA12O60330 AP005435.1-201ENST00000529293 1178 ntBASIC21.84■■□□□ 1.09
PCDHGA12O60330 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHGA12O60330 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA12O60330 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHGA12O60330 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHGA12O60330 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA12O60330 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA12O60330 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGA12O60330 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA12O60330 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA12O60330 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA12O60330 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA12O60330 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA12O60330 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA12O60330 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA12O60330 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA12O60330 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDHGA12O60330 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDHGA12O60330 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDHGA12O60330 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PCDHGA12O60330 DUX4L4-201ENST00000566884 1269 ntBASIC21.83■■□□□ 1.09
PCDHGA12O60330 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA12O60330 AC010525.1-201ENST00000585559 441 ntBASIC21.83■■□□□ 1.09
PCDHGA12O60330 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA12O60330 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA12O60330 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDHGA12O60330 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDHGA12O60330 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDHGA12O60330 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
PCDHGA12O60330 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
PCDHGA12O60330 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA12O60330 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA12O60330 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGA12O60330 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA12O60330 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PCDHGA12O60330 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA12O60330 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA12O60330 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGA12O60330 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGA12O60330 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
PCDHGA12O60330 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PCDHGA12O60330 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA12O60330 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGA12O60330 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA12O60330 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA12O60330 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA12O60330 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA12O60330 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA12O60330 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA12O60330 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGA12O60330 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA12O60330 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGA12O60330 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA12O60330 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGA12O60330 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PCDHGA12O60330 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms