Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.28■□□□□ 0.84
ARHGEF9O43307 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF9O43307 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.28■□□□□ 0.84
ARHGEF9O43307 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.28■□□□□ 0.84
ARHGEF9O43307 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF9O43307 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.28■□□□□ 0.84
ARHGEF9O43307 LINC00565-201ENST00000562710 2331 ntBASIC20.28■□□□□ 0.84
ARHGEF9O43307 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.28■□□□□ 0.84
ARHGEF9O43307 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ARHGEF9O43307 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.28■□□□□ 0.84
ARHGEF9O43307 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF9O43307 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF9O43307 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ARHGEF9O43307 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF9O43307 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF9O43307 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF9O43307 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.27■□□□□ 0.84
ARHGEF9O43307 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF9O43307 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF9O43307 AC131281.2-201ENST00000520478 145 ntBASIC20.27■□□□□ 0.84
ARHGEF9O43307 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.27■□□□□ 0.84
ARHGEF9O43307 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF9O43307 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ARHGEF9O43307 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.27■□□□□ 0.84
ARHGEF9O43307 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF9O43307 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.27■□□□□ 0.84
ARHGEF9O43307 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ARHGEF9O43307 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF9O43307 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF9O43307 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF9O43307 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.26■□□□□ 0.83
ARHGEF9O43307 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF9O43307 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF9O43307 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF9O43307 AC004448.1-201ENST00000458332 883 ntBASIC20.26■□□□□ 0.83
ARHGEF9O43307 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF9O43307 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF9O43307 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ARHGEF9O43307 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF9O43307 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF9O43307 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ARHGEF9O43307 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ARHGEF9O43307 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ARHGEF9O43307 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF9O43307 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF9O43307 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF9O43307 AC092068.2-201ENST00000590491 1708 ntBASIC20.25■□□□□ 0.83
ARHGEF9O43307 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF9O43307 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.25■□□□□ 0.83
ARHGEF9O43307 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.25■□□□□ 0.83
ARHGEF9O43307 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ARHGEF9O43307 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF9O43307 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF9O43307 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF9O43307 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF9O43307 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF9O43307 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.24■□□□□ 0.83
ARHGEF9O43307 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF9O43307 AL356740.2-201ENST00000601559 647 ntBASIC20.24■□□□□ 0.83
ARHGEF9O43307 SLC25A24-204ENST00000569674 2357 ntBASIC20.24■□□□□ 0.83
ARHGEF9O43307 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF9O43307 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.24■□□□□ 0.83
ARHGEF9O43307 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF9O43307 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.24■□□□□ 0.83
ARHGEF9O43307 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.24■□□□□ 0.83
ARHGEF9O43307 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
ARHGEF9O43307 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.23■□□□□ 0.83
ARHGEF9O43307 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.23■□□□□ 0.83
ARHGEF9O43307 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.23■□□□□ 0.83
ARHGEF9O43307 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.23■□□□□ 0.83
ARHGEF9O43307 AC010997.5-201ENST00000609182 354 ntBASIC20.23■□□□□ 0.83
ARHGEF9O43307 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF9O43307 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ARHGEF9O43307 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ARHGEF9O43307 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.23■□□□□ 0.83
ARHGEF9O43307 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ARHGEF9O43307 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.23■□□□□ 0.83
ARHGEF9O43307 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF9O43307 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ARHGEF9O43307 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF9O43307 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.22■□□□□ 0.83
ARHGEF9O43307 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF9O43307 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.22■□□□□ 0.83
ARHGEF9O43307 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF9O43307 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF9O43307 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF9O43307 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ARHGEF9O43307 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF9O43307 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF9O43307 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ARHGEF9O43307 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF9O43307 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF9O43307 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF9O43307 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF9O43307 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF9O43307 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.21■□□□□ 0.83
ARHGEF9O43307 MTDHP2-201ENST00000601468 714 ntBASIC20.21■□□□□ 0.83
ARHGEF9O43307 MIR6724-1-201ENST00000616420 92 ntBASIC20.21■□□□□ 0.83
ARHGEF9O43307 MIR6724-2-201ENST00000616483 92 ntBASIC20.21■□□□□ 0.83
ARHGEF9O43307 MIR6724-4-201ENST00000617390 92 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms