Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.93■□□□□ 0.62
PHF1O43189 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF1O43189 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PHF1O43189 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.93■□□□□ 0.62
PHF1O43189 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF1O43189 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF1O43189 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF1O43189 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.93■□□□□ 0.62
PHF1O43189 AC090192.1-201ENST00000517740 490 ntBASIC18.93■□□□□ 0.62
PHF1O43189 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF1O43189 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF1O43189 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PHF1O43189 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.93■□□□□ 0.62
PHF1O43189 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF1O43189 ANOS2P-203ENST00000472227 1816 ntBASIC18.93■□□□□ 0.62
PHF1O43189 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PHF1O43189 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF1O43189 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF1O43189 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF1O43189 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF1O43189 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF1O43189 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHF1O43189 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHF1O43189 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PHF1O43189 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
PHF1O43189 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PHF1O43189 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHF1O43189 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHF1O43189 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PHF1O43189 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHF1O43189 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PHF1O43189 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PHF1O43189 MIR939-201ENST00000401314 82 ntBASIC18.91■□□□□ 0.62
PHF1O43189 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.91■□□□□ 0.62
PHF1O43189 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.91■□□□□ 0.62
PHF1O43189 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHF1O43189 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHF1O43189 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHF1O43189 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PHF1O43189 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHF1O43189 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHF1O43189 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
PHF1O43189 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHF1O43189 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHF1O43189 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHF1O43189 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PHF1O43189 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHF1O43189 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHF1O43189 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHF1O43189 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.9■□□□□ 0.62
PHF1O43189 EP400NL-214ENST00000641289 2402 ntBASIC18.9■□□□□ 0.62
PHF1O43189 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PHF1O43189 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PHF1O43189 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PHF1O43189 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHF1O43189 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.9■□□□□ 0.62
PHF1O43189 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.89■□□□□ 0.62
PHF1O43189 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PHF1O43189 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
PHF1O43189 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHF1O43189 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PHF1O43189 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHF1O43189 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PHF1O43189 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.89■□□□□ 0.61
PHF1O43189 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.89■□□□□ 0.61
PHF1O43189 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.89■□□□□ 0.61
PHF1O43189 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.89■□□□□ 0.61
PHF1O43189 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PHF1O43189 RARRES2P11-201ENST00000635158 484 ntBASIC18.89■□□□□ 0.61
PHF1O43189 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHF1O43189 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
PHF1O43189 AL161729.1-201ENST00000604104 1402 ntBASIC18.89■□□□□ 0.61
PHF1O43189 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHF1O43189 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PHF1O43189 AP001330.3-201ENST00000520123 633 ntBASIC18.88■□□□□ 0.61
PHF1O43189 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.88■□□□□ 0.61
PHF1O43189 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.88■□□□□ 0.61
PHF1O43189 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHF1O43189 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PHF1O43189 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.88■□□□□ 0.61
PHF1O43189 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.88■□□□□ 0.61
PHF1O43189 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PHF1O43189 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF1O43189 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PHF1O43189 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PHF1O43189 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PHF1O43189 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.87■□□□□ 0.61
PHF1O43189 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHF1O43189 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.87■□□□□ 0.61
PHF1O43189 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF1O43189 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHF1O43189 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.87■□□□□ 0.61
PHF1O43189 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.87■□□□□ 0.61
PHF1O43189 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHF1O43189 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.87■□□□□ 0.61
PHF1O43189 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHF1O43189 AC091305.1-201ENST00000479476 895 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms