Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDUFS4O43181 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDUFS4O43181 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NDUFS4O43181 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NDUFS4O43181 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
NDUFS4O43181 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
NDUFS4O43181 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDUFS4O43181 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS4O43181 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS4O43181 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS4O43181 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS4O43181 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.13■□□□□ 0.97
NDUFS4O43181 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NDUFS4O43181 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.13■□□□□ 0.97
NDUFS4O43181 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.13■□□□□ 0.97
NDUFS4O43181 AL136162.1-201ENST00000607711 1078 ntBASIC21.13■□□□□ 0.97
NDUFS4O43181 AC011298.3-201ENST00000615796 283 ntBASIC21.13■□□□□ 0.97
NDUFS4O43181 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS4O43181 C1orf229-201ENST00000623686 2258 ntBASIC21.13■□□□□ 0.97
NDUFS4O43181 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.13■□□□□ 0.97
NDUFS4O43181 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NDUFS4O43181 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFS4O43181 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.12■□□□□ 0.97
NDUFS4O43181 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFS4O43181 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.12■□□□□ 0.97
NDUFS4O43181 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFS4O43181 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NDUFS4O43181 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.12■□□□□ 0.97
NDUFS4O43181 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.12■□□□□ 0.97
NDUFS4O43181 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.12■□□□□ 0.97
NDUFS4O43181 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.12■□□□□ 0.97
NDUFS4O43181 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFS4O43181 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.12■□□□□ 0.97
NDUFS4O43181 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NDUFS4O43181 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFS4O43181 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFS4O43181 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFS4O43181 AC135279.3-201ENST00000610945 1311 ntBASIC21.11■□□□□ 0.97
NDUFS4O43181 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFS4O43181 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NDUFS4O43181 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
NDUFS4O43181 AC110285.6-201ENST00000617652 491 ntBASIC21.11■□□□□ 0.97
NDUFS4O43181 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.11■□□□□ 0.97
NDUFS4O43181 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NDUFS4O43181 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFS4O43181 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS4O43181 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.1■□□□□ 0.97
NDUFS4O43181 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS4O43181 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.1■□□□□ 0.97
NDUFS4O43181 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS4O43181 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.1■□□□□ 0.97
NDUFS4O43181 AC024257.2-201ENST00000549699 147 ntBASIC21.1■□□□□ 0.97
NDUFS4O43181 AC136469.2-201ENST00000623944 1028 ntBASIC21.1■□□□□ 0.97
NDUFS4O43181 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS4O43181 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.1■□□□□ 0.97
NDUFS4O43181 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS4O43181 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS4O43181 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFS4O43181 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.09■□□□□ 0.97
NDUFS4O43181 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
NDUFS4O43181 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS4O43181 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS4O43181 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS4O43181 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS4O43181 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS4O43181 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS4O43181 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS4O43181 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.09■□□□□ 0.97
NDUFS4O43181 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFS4O43181 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NDUFS4O43181 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NDUFS4O43181 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.08■□□□□ 0.97
NDUFS4O43181 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NDUFS4O43181 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NDUFS4O43181 PBX2P1-201ENST00000493219 1291 ntBASIC21.08■□□□□ 0.97
NDUFS4O43181 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.08■□□□□ 0.97
NDUFS4O43181 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.08■□□□□ 0.97
NDUFS4O43181 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.08■□□□□ 0.97
NDUFS4O43181 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
NDUFS4O43181 MIR4767-201ENST00000582827 78 ntBASIC21.08■□□□□ 0.97
NDUFS4O43181 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NDUFS4O43181 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.08■□□□□ 0.96
NDUFS4O43181 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
NDUFS4O43181 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.08■□□□□ 0.96
NDUFS4O43181 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
NDUFS4O43181 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.07■□□□□ 0.96
NDUFS4O43181 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS4O43181 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.07■□□□□ 0.96
NDUFS4O43181 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.07■□□□□ 0.96
NDUFS4O43181 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS4O43181 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.07■□□□□ 0.96
NDUFS4O43181 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.07■□□□□ 0.96
NDUFS4O43181 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.07■□□□□ 0.96
NDUFS4O43181 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS4O43181 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.07■□□□□ 0.96
NDUFS4O43181 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.07■□□□□ 0.96
NDUFS4O43181 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS4O43181 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS4O43181 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS4O43181 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms