Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
UPK2O00526 CLDN5-201ENST00000403084 2357 ntBASIC17.71■□□□□ 0.42
UPK2O00526 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK2O00526 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPK2O00526 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
UPK2O00526 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK2O00526 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK2O00526 AC080038.3-201ENST00000623346 1952 ntBASIC17.7■□□□□ 0.42
UPK2O00526 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.7■□□□□ 0.42
UPK2O00526 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPK2O00526 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.7■□□□□ 0.42
UPK2O00526 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.7■□□□□ 0.42
UPK2O00526 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK2O00526 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK2O00526 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPK2O00526 AC137767.1-201ENST00000602918 1920 ntBASIC17.7■□□□□ 0.42
UPK2O00526 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPK2O00526 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
UPK2O00526 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK2O00526 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK2O00526 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
UPK2O00526 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK2O00526 AC009102.2-201ENST00000606772 1639 ntBASIC17.69■□□□□ 0.42
UPK2O00526 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
UPK2O00526 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UPK2O00526 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK2O00526 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.69■□□□□ 0.42
UPK2O00526 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.69■□□□□ 0.42
UPK2O00526 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK2O00526 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.69■□□□□ 0.42
UPK2O00526 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UPK2O00526 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.69■□□□□ 0.42
UPK2O00526 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
UPK2O00526 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
UPK2O00526 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK2O00526 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UPK2O00526 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK2O00526 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
UPK2O00526 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
UPK2O00526 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.68■□□□□ 0.42
UPK2O00526 RARRES2P1-201ENST00000474487 481 ntBASIC17.68■□□□□ 0.42
UPK2O00526 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.68■□□□□ 0.42
UPK2O00526 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UPK2O00526 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UPK2O00526 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
UPK2O00526 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK2O00526 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.68■□□□□ 0.42
UPK2O00526 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK2O00526 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
UPK2O00526 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK2O00526 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UPK2O00526 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK2O00526 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.68■□□□□ 0.42
UPK2O00526 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.67■□□□□ 0.42
UPK2O00526 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK2O00526 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK2O00526 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UPK2O00526 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK2O00526 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UPK2O00526 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK2O00526 AC239859.2-201ENST00000444165 318 ntBASIC17.67■□□□□ 0.42
UPK2O00526 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK2O00526 AC010997.5-201ENST00000609182 354 ntBASIC17.67■□□□□ 0.42
UPK2O00526 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UPK2O00526 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK2O00526 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK2O00526 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
UPK2O00526 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK2O00526 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK2O00526 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.66■□□□□ 0.42
UPK2O00526 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK2O00526 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UPK2O00526 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK2O00526 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK2O00526 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UPK2O00526 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK2O00526 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK2O00526 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.66■□□□□ 0.42
UPK2O00526 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK2O00526 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK2O00526 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
UPK2O00526 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.65■□□□□ 0.42
UPK2O00526 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
UPK2O00526 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
UPK2O00526 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.65■□□□□ 0.42
UPK2O00526 C11orf96-202ENST00000528572 1834 ntBASIC17.65■□□□□ 0.42
UPK2O00526 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK2O00526 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UPK2O00526 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms