Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBAL3A6NHL2 AL121603.2-201ENST00000557373 2117 ntBASIC19.72■□□□□ 0.75
TUBAL3A6NHL2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 ABCB10P4-201ENST00000566803 2184 ntBASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 C1orf229-201ENST00000623686 2258 ntBASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 AL162430.1-201ENST00000480705 870 ntBASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBAL3A6NHL2 AC137767.1-201ENST00000602918 1920 ntBASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 SLC25A24-204ENST00000569674 2357 ntBASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 AC126544.1-201ENST00000580842 1059 ntBASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 pRNA.6-201ENST00000610482 90 ntBASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 pRNA.5-201ENST00000612139 90 ntBASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 pRNA.11-201ENST00000618423 90 ntBASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 pRNA.13-201ENST00000619112 90 ntBASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBAL3A6NHL2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 ALDH1A3-203ENST00000557963 1670 ntBASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBAL3A6NHL2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBAL3A6NHL2 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.68■□□□□ 0.74
TUBAL3A6NHL2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBAL3A6NHL2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.68■□□□□ 0.74
TUBAL3A6NHL2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TUBAL3A6NHL2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBAL3A6NHL2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TUBAL3A6NHL2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TUBAL3A6NHL2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 AC141586.4-201ENST00000624558 1573 ntBASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 AP003733.4-201ENST00000623785 1697 ntBASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBAL3A6NHL2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
TUBAL3A6NHL2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TUBAL3A6NHL2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBAL3A6NHL2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBAL3A6NHL2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.65■□□□□ 0.74
TUBAL3A6NHL2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBAL3A6NHL2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms