Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LINC01546A6NGU7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 AC007029.1-201ENST00000604183 313 ntBASIC15.65■□□□□ 0.1
LINC01546A6NGU7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01546A6NGU7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01546A6NGU7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01546A6NGU7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01546A6NGU7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01546A6NGU7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01546A6NGU7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01546A6NGU7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LINC01546A6NGU7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01546A6NGU7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC01546A6NGU7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LINC01546A6NGU7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC01546A6NGU7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 RPS2P7-201ENST00000447334 885 ntBASIC15.62■□□□□ 0.09
LINC01546A6NGU7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01546A6NGU7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01546A6NGU7 AC144652.1-201ENST00000609974 1624 ntBASIC15.61■□□□□ 0.09
LINC01546A6NGU7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01546A6NGU7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms