Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TMEM235A6NFC5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM235A6NFC5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.8■□□□□ 0.6
TMEM235A6NFC5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM235A6NFC5 AC120024.1-201ENST00000562672 995 ntBASIC18.8■□□□□ 0.6
TMEM235A6NFC5 AC019171.1-201ENST00000601251 1056 ntBASIC18.8■□□□□ 0.6
TMEM235A6NFC5 U85056.1-201ENST00000616429 682 ntBASIC18.8■□□□□ 0.6
TMEM235A6NFC5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM235A6NFC5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM235A6NFC5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TMEM235A6NFC5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM235A6NFC5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM235A6NFC5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM235A6NFC5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM235A6NFC5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM235A6NFC5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM235A6NFC5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM235A6NFC5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM235A6NFC5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM235A6NFC5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM235A6NFC5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM235A6NFC5 AC004448.1-201ENST00000458332 883 ntBASIC18.79■□□□□ 0.6
TMEM235A6NFC5 AC026310.3-201ENST00000625186 2373 ntBASIC18.79■□□□□ 0.6
TMEM235A6NFC5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM235A6NFC5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM235A6NFC5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TMEM235A6NFC5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TMEM235A6NFC5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
TMEM235A6NFC5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEM235A6NFC5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEM235A6NFC5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEM235A6NFC5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM235A6NFC5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM235A6NFC5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM235A6NFC5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.77■□□□□ 0.6
TMEM235A6NFC5 AC139795.1-202ENST00000500444 432 ntBASIC18.77■□□□□ 0.6
TMEM235A6NFC5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.77■□□□□ 0.6
TMEM235A6NFC5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TMEM235A6NFC5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.77■□□□□ 0.59
TMEM235A6NFC5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM235A6NFC5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM235A6NFC5 FAM99A-202ENST00000538190 1989 ntBASIC18.75■□□□□ 0.59
TMEM235A6NFC5 AC144652.1-201ENST00000609974 1624 ntBASIC18.75■□□□□ 0.59
TMEM235A6NFC5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM235A6NFC5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TMEM235A6NFC5 KRT18P60-201ENST00000312876 1297 ntBASIC18.75■□□□□ 0.59
TMEM235A6NFC5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.75■□□□□ 0.59
TMEM235A6NFC5 MIR4281-201ENST00000580852 62 ntBASIC18.75■□□□□ 0.59
TMEM235A6NFC5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TMEM235A6NFC5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM235A6NFC5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM235A6NFC5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM235A6NFC5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM235A6NFC5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM235A6NFC5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM235A6NFC5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 RARRES2P2-201ENST00000394842 485 ntBASIC18.74■□□□□ 0.59
TMEM235A6NFC5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TMEM235A6NFC5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms