Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 AC005703.6-201ENST00000623265 1329 ntBASIC21.98■■□□□ 1.11
CCDC189A1A4V9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CCDC189A1A4V9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC189A1A4V9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
CCDC189A1A4V9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.97■■□□□ 1.11
CCDC189A1A4V9 AC144652.1-201ENST00000609974 1624 ntBASIC21.97■■□□□ 1.11
CCDC189A1A4V9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCDC189A1A4V9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC189A1A4V9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC189A1A4V9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 BX664725.1-201ENST00000438252 379 ntBASIC21.96■■□□□ 1.11
CCDC189A1A4V9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 FP325331.1-202ENST00000623531 1380 ntBASIC21.96■■□□□ 1.11
CCDC189A1A4V9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCDC189A1A4V9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.95■■□□□ 1.11
CCDC189A1A4V9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC189A1A4V9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC189A1A4V9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC189A1A4V9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC189A1A4V9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.95■■□□□ 1.1
CCDC189A1A4V9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CCDC189A1A4V9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC189A1A4V9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.95■■□□□ 1.1
CCDC189A1A4V9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 AL353803.4-201ENST00000565882 1934 ntBASIC21.94■■□□□ 1.1
CCDC189A1A4V9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC189A1A4V9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC189A1A4V9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC189A1A4V9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC189A1A4V9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC189A1A4V9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC189A1A4V9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCDC189A1A4V9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC189A1A4V9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC189A1A4V9 Z92544.1-202ENST00000571933 1220 ntBASIC21.93■■□□□ 1.1
CCDC189A1A4V9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC189A1A4V9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCDC189A1A4V9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCDC189A1A4V9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC189A1A4V9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CCDC189A1A4V9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC189A1A4V9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC189A1A4V9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC189A1A4V9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC189A1A4V9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC189A1A4V9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC189A1A4V9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC189A1A4V9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC189A1A4V9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC189A1A4V9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC189A1A4V9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC189A1A4V9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC189A1A4V9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms