Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-4A0A0B4J246 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-4A0A0B4J246 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TRAV8-4A0A0B4J246 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-4A0A0B4J246 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 AC103834.1-201ENST00000520383 144 ntBASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 AC103724.3-201ENST00000564481 992 ntBASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 AL031848.2-201ENST00000607670 837 ntBASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 KRT8P33-201ENST00000508125 1423 ntBASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV8-4A0A0B4J246 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 AC137630.3-201ENST00000607245 391 ntBASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-4A0A0B4J246 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 AC007375.3-201ENST00000600936 2314 ntBASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-4A0A0B4J246 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 AC233723.2-201ENST00000623798 2106 ntBASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-4A0A0B4J246 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms