Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRAV3A0A0B4J244 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAV3A0A0B4J244 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TRAV3A0A0B4J244 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV3A0A0B4J244 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV3A0A0B4J244 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV3A0A0B4J244 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV3A0A0B4J244 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV3A0A0B4J244 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV3A0A0B4J244 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV3A0A0B4J244 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV3A0A0B4J244 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV3A0A0B4J244 AC092028.1-203ENST00000608262 953 ntBASIC17.76■□□□□ 0.43
TRAV3A0A0B4J244 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAV3A0A0B4J244 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV3A0A0B4J244 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRAV3A0A0B4J244 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV3A0A0B4J244 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV3A0A0B4J244 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 AC092053.2-201ENST00000640557 1818 ntBASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 FP325331.1-202ENST00000623531 1380 ntBASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV3A0A0B4J244 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 AC137767.1-201ENST00000602918 1920 ntBASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 AC007375.3-201ENST00000600936 2314 ntBASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV3A0A0B4J244 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
TRAV3A0A0B4J244 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV3A0A0B4J244 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAV3A0A0B4J244 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV3A0A0B4J244 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV3A0A0B4J244 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAV3A0A0B4J244 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 C11orf96-202ENST00000528572 1834 ntBASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 RARRES2P1-201ENST00000474487 481 ntBASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 AC009102.2-201ENST00000606772 1639 ntBASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV3A0A0B4J244 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 KRT125P-201ENST00000546827 989 ntBASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV3A0A0B4J244 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV3A0A0B4J244 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 DUX4L4-201ENST00000566884 1269 ntBASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 MTDHP2-201ENST00000601468 714 ntBASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 MIR4787-201ENST00000607364 84 ntBASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TRAV3A0A0B4J244 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms