Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC137767.1-201ENST00000602918 1920 ntBASIC15.32■□□□□ 0.04
TRAV13-1A0A0B4J241 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV13-1A0A0B4J241 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV13-1A0A0B4J241 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV13-1A0A0B4J241 AIRN-201ENST00000601203 4374 ntBASIC15.31■□□□□ 0.04
TRAV13-1A0A0B4J241 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-1A0A0B4J241 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-1A0A0B4J241 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV13-1A0A0B4J241 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRAV13-1A0A0B4J241 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV13-1A0A0B4J241 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV13-1A0A0B4J241 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-1A0A0B4J241 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV13-1A0A0B4J241 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRAV13-1A0A0B4J241 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 DUX4L18-201ENST00000553347 1267 ntBASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 AL353803.4-201ENST00000565882 1934 ntBASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 BHLHE23-202ENST00000612929 1109 ntBASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV13-1A0A0B4J241 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 KRT18P60-201ENST00000312876 1297 ntBASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 AC019171.1-201ENST00000601251 1056 ntBASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 AC007375.3-201ENST00000600936 2314 ntBASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV13-1A0A0B4J241 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 AC120024.1-201ENST00000562672 995 ntBASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV13-1A0A0B4J241 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRAV13-1A0A0B4J241 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV13-1A0A0B4J241 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-1A0A0B4J241 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-1A0A0B4J241 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV13-1A0A0B4J241 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-1A0A0B4J241 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV13-1A0A0B4J241 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV13-1A0A0B4J241 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV13-1A0A0B4J241 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV13-1A0A0B4J241 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms