Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 KRT18P60-201ENST00000312876 1297 ntBASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 RARRES2P2-201ENST00000394842 485 ntBASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AC139795.1-202ENST00000500444 432 ntBASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
TRAV8-1A0A0A6YYK1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AC019171.1-201ENST00000601251 1056 ntBASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-1A0A0A6YYK1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AC004448.1-201ENST00000458332 883 ntBASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 DUX4L18-201ENST00000553347 1267 ntBASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-1A0A0A6YYK1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV8-1A0A0A6YYK1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV8-1A0A0A6YYK1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 MIR4281-201ENST00000580852 62 ntBASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-1A0A0A6YYK1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 AC026310.3-201ENST00000625186 2373 ntBASIC16.69■□□□□ 0.26
TRAV8-1A0A0A6YYK1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms