Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-8A0A0A6YYG3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
TRBV6-8A0A0A6YYG3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.33■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-8A0A0A6YYG3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-8A0A0A6YYG3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AL451085.2-201ENST00000605085 799 ntBASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRBV6-8A0A0A6YYG3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-8A0A0A6YYG3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AC087742.1-201ENST00000575880 1738 ntBASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 C17orf82-201ENST00000623772 1530 ntBASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-8A0A0A6YYG3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 LINC00565-201ENST00000562710 2331 ntBASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 MIR6724-1-201ENST00000616420 92 ntBASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 MIR6724-2-201ENST00000616483 92 ntBASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 MIR6724-4-201ENST00000617390 92 ntBASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 MIR6724-3-201ENST00000622482 92 ntBASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-8A0A0A6YYG3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms