Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 EDA-201ENST00000338901 1233 ntBASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SERBP1P1-201ENST00000396021 1160 ntBASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SUDS3P1-201ENST00000505831 966 ntBASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 AL138724.1-201ENST00000606771 1088 ntBASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 AC133637.1-201ENST00000624115 1537 ntBASIC20.07■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.06■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.06■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 AC142381.2-201ENST00000566120 298 ntBASIC20.06■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.06■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.06■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 AC004687.1-201ENST00000579003 1625 ntBASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 AL355001.2-201ENST00000620617 1191 ntBASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 AC068473.5-201ENST00000616428 2072 ntBASIC20.04■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.04■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.04■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.04■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.02■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 AC011298.3-201ENST00000615796 283 ntBASIC20.02■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.02■□□□□ 0.8
TNFSF12-TNFSF13A0A0A6YY99 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 MIR4767-201ENST00000582827 78 ntBASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 GRAMD4P4-201ENST00000613563 1115 ntBASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 AC136469.2-201ENST00000623944 1028 ntBASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF12-TNFSF13A0A0A6YY99 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms