Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 PMF1-201ENST00000368273 884 ntTSL 2 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 PIFO-201ENST00000369737 746 ntTSL 2 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 AL080243.1-201ENST00000423293 1060 ntBASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 AC009084.3-201ENST00000623356 437 ntBASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 AC002472.4-201ENST00000641915 272 ntBASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
PRICKLE4Q2TBC4 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PRICKLE4Q2TBC4 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 IQCF4-203ENST00000428561 420 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 AC253536.4-201ENST00000440539 267 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 RN7SL605P-201ENST00000577229 281 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 AC010632.2-201ENST00000588369 1224 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 AC073592.2-201ENST00000623062 780 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 AL606760.3-201ENST00000569869 3591 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 FAM90A21P-201ENST00000510875 1396 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 FAM90A15P-201ENST00000514465 1395 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 FAM90A6P-201ENST00000515148 1394 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 FAM90A16P-201ENST00000526662 1395 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 FAM90A9P-201ENST00000527940 1395 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 FAM90A5P-201ENST00000528738 1395 ntBASIC12.27□□□□□ -0.45
PRICKLE4Q2TBC4 FAM90A14P-201ENST00000530386 1395 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms