Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1DP48730 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CSNK1DP48730 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CSNK1DP48730 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CSNK1DP48730 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CSNK1DP48730 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC13.19□□□□□ -0.3
CSNK1DP48730 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1DP48730 AL137244.1-201ENST00000422931 865 ntBASIC13.19□□□□□ -0.3
CSNK1DP48730 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CSNK1DP48730 RN7SL789P-201ENST00000478944 293 ntBASIC13.19□□□□□ -0.3
CSNK1DP48730 HNRNPA1P55-201ENST00000505935 955 ntBASIC13.19□□□□□ -0.3
CSNK1DP48730 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC13.19□□□□□ -0.3
CSNK1DP48730 AL590235.1-201ENST00000564650 861 ntBASIC13.19□□□□□ -0.3
CSNK1DP48730 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC13.19□□□□□ -0.3
CSNK1DP48730 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CSNK1DP48730 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1DP48730 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC13.19□□□□□ -0.3
CSNK1DP48730 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1DP48730 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1DP48730 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1DP48730 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC13.18□□□□□ -0.3
CSNK1DP48730 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CSNK1DP48730 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 CASC4P1-201ENST00000456608 1312 ntBASIC13.18□□□□□ -0.3
CSNK1DP48730 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CSNK1DP48730 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CSNK1DP48730 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CSNK1DP48730 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13.18□□□□□ -0.3
CSNK1DP48730 RBMXP1-201ENST00000408004 1191 ntBASIC13.18□□□□□ -0.3
CSNK1DP48730 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC13.18□□□□□ -0.3
CSNK1DP48730 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC13.18□□□□□ -0.3
CSNK1DP48730 PSME2P2-201ENST00000453033 700 ntBASIC13.18□□□□□ -0.3
CSNK1DP48730 AP000533.1-201ENST00000456143 1177 ntBASIC13.18□□□□□ -0.3
CSNK1DP48730 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC13.18□□□□□ -0.3
CSNK1DP48730 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 BCRP4-201ENST00000506079 804 ntBASIC13.18□□□□□ -0.3
CSNK1DP48730 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC13.18□□□□□ -0.3
CSNK1DP48730 IGLVI-63-201ENST00000524184 384 ntBASIC13.18□□□□□ -0.3
CSNK1DP48730 AP001102.1-201ENST00000528959 409 ntBASIC13.18□□□□□ -0.3
CSNK1DP48730 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
CSNK1DP48730 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC13.18□□□□□ -0.3
CSNK1DP48730 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.18□□□□□ -0.3
CSNK1DP48730 AC009118.3-201ENST00000622896 873 ntBASIC13.18□□□□□ -0.3
CSNK1DP48730 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CSNK1DP48730 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC13.18□□□□□ -0.3
CSNK1DP48730 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC13.18□□□□□ -0.3
CSNK1DP48730 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CSNK1DP48730 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1DP48730 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CSNK1DP48730 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CSNK1DP48730 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC13.17□□□□□ -0.3
CSNK1DP48730 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CSNK1DP48730 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1DP48730 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CSNK1DP48730 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms