Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 AC009108.4-201ENST00000623284 2451 ntBASIC13.8□□□□□ -0.2
MMP13P45452 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
MMP13P45452 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC13.79□□□□□ -0.2
MMP13P45452 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC13.79□□□□□ -0.2
MMP13P45452 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
MMP13P45452 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC13.79□□□□□ -0.2
MMP13P45452 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.79□□□□□ -0.2
MMP13P45452 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 FP325330.2-201ENST00000624219 5630 ntBASIC13.79□□□□□ -0.2
MMP13P45452 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC13.79□□□□□ -0.2
MMP13P45452 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
MMP13P45452 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.79□□□□□ -0.2
MMP13P45452 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.79□□□□□ -0.2
MMP13P45452 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.79□□□□□ -0.2
MMP13P45452 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.79□□□□□ -0.2
MMP13P45452 LYPLA2P1-203ENST00000447689 696 ntBASIC13.79□□□□□ -0.2
MMP13P45452 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.79□□□□□ -0.2
MMP13P45452 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.79□□□□□ -0.2
MMP13P45452 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.79□□□□□ -0.2
MMP13P45452 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
MMP13P45452 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC13.79□□□□□ -0.2
MMP13P45452 CES1P2-201ENST00000566467 1242 ntBASIC13.79□□□□□ -0.2
MMP13P45452 MIR4649-201ENST00000582839 64 ntBASIC13.79□□□□□ -0.2
MMP13P45452 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
MMP13P45452 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 STRCP1-201ENST00000509801 5328 ntBASIC13.79□□□□□ -0.2
MMP13P45452 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
MMP13P45452 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC13.79□□□□□ -0.2
MMP13P45452 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC13.79□□□□□ -0.2
MMP13P45452 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
MMP13P45452 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MMP13P45452 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 DBIL5P-203ENST00000536214 2677 ntBASIC13.78□□□□□ -0.2
MMP13P45452 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MMP13P45452 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MMP13P45452 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC13.78□□□□□ -0.2
MMP13P45452 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
MMP13P45452 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MMP13P45452 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC13.78□□□□□ -0.2
MMP13P45452 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC13.78□□□□□ -0.2
MMP13P45452 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
MMP13P45452 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MMP13P45452 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.78□□□□□ -0.2
MMP13P45452 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP13P45452 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP13P45452 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP13P45452 AC104212.2-201ENST00000478813 628 ntBASIC13.78□□□□□ -0.2
MMP13P45452 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP13P45452 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP13P45452 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.78□□□□□ -0.2
MMP13P45452 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.78□□□□□ -0.2
MMP13P45452 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP13P45452 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
MMP13P45452 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP13P45452 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
MMP13P45452 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.78□□□□□ -0.2
MMP13P45452 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.78□□□□□ -0.2
MMP13P45452 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MMP13P45452 CSTP2-201ENST00000610599 398 ntBASIC13.78□□□□□ -0.2
MMP13P45452 AL118522.1-201ENST00000611368 560 ntBASIC13.78□□□□□ -0.2
MMP13P45452 AL591926.3-201ENST00000611630 238 ntBASIC13.78□□□□□ -0.2
MMP13P45452 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms