Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.58□□□□□ -0.4
SCN2BO60939 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.58□□□□□ -0.4
SCN2BO60939 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.58□□□□□ -0.4
SCN2BO60939 GGT8P-201ENST00000418938 532 ntBASIC12.58□□□□□ -0.4
SCN2BO60939 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SCN2BO60939 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.58□□□□□ -0.4
SCN2BO60939 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.58□□□□□ -0.4
SCN2BO60939 AC234782.1-201ENST00000451950 919 ntBASIC12.58□□□□□ -0.4
SCN2BO60939 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.58□□□□□ -0.4
SCN2BO60939 AC130709.1-201ENST00000484779 1212 ntBASIC12.58□□□□□ -0.4
SCN2BO60939 RPL29P2-202ENST00000498671 657 ntBASIC12.58□□□□□ -0.4
SCN2BO60939 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.58□□□□□ -0.4
SCN2BO60939 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC12.58□□□□□ -0.4
SCN2BO60939 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.58□□□□□ -0.4
SCN2BO60939 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.58□□□□□ -0.4
SCN2BO60939 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.58□□□□□ -0.4
SCN2BO60939 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.58□□□□□ -0.4
SCN2BO60939 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.58□□□□□ -0.4
SCN2BO60939 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.58□□□□□ -0.4
SCN2BO60939 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.58□□□□□ -0.4
SCN2BO60939 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.58□□□□□ -0.4
SCN2BO60939 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
SCN2BO60939 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.58□□□□□ -0.4
SCN2BO60939 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
SCN2BO60939 AC073862.3-201ENST00000624597 1648 ntBASIC12.58□□□□□ -0.4
SCN2BO60939 POM121L7P-201ENST00000329949 2404 ntBASIC12.58□□□□□ -0.4
SCN2BO60939 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
SCN2BO60939 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 AL162615.1-201ENST00000429893 1653 ntBASIC12.57□□□□□ -0.4
SCN2BO60939 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC12.57□□□□□ -0.4
SCN2BO60939 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC12.57□□□□□ -0.4
SCN2BO60939 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SCN2BO60939 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 ABCD1P4-201ENST00000399687 604 ntBASIC12.57□□□□□ -0.4
SCN2BO60939 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.57□□□□□ -0.4
SCN2BO60939 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.57□□□□□ -0.4
SCN2BO60939 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC12.57□□□□□ -0.4
SCN2BO60939 RPS15P5-201ENST00000449885 432 ntBASIC12.57□□□□□ -0.4
SCN2BO60939 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 AC245884.6-201ENST00000515672 1067 ntBASIC12.57□□□□□ -0.4
SCN2BO60939 RNA5SP417-201ENST00000516459 108 ntBASIC12.57□□□□□ -0.4
SCN2BO60939 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.57□□□□□ -0.4
SCN2BO60939 IGLV3-15-201ENST00000518356 244 ntBASIC12.57□□□□□ -0.4
SCN2BO60939 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SCN2BO60939 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.57□□□□□ -0.4
SCN2BO60939 FGFR3P5-201ENST00000564496 886 ntBASIC12.57□□□□□ -0.4
SCN2BO60939 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC12.57□□□□□ -0.4
SCN2BO60939 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.57□□□□□ -0.4
SCN2BO60939 AC137723.2-201ENST00000623540 398 ntBASIC12.57□□□□□ -0.4
SCN2BO60939 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SCN2BO60939 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.57□□□□□ -0.4
SCN2BO60939 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SCN2BO60939 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SCN2BO60939 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.57□□□□□ -0.4
SCN2BO60939 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCN2BO60939 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms