Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CHL1O00533 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHL1O00533 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC16.75■□□□□ 0.27
CHL1O00533 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 FKBP4P1-201ENST00000507284 1347 ntBASIC16.75■□□□□ 0.27
CHL1O00533 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHL1O00533 AC025538.1-201ENST00000510707 1486 ntBASIC16.75■□□□□ 0.27
CHL1O00533 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC16.75■□□□□ 0.27
CHL1O00533 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 AF186996.6-201ENST00000485294 149 ntBASIC16.75■□□□□ 0.27
CHL1O00533 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC16.75■□□□□ 0.27
CHL1O00533 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC16.75■□□□□ 0.27
CHL1O00533 RN7SL602P-201ENST00000578326 324 ntBASIC16.75■□□□□ 0.27
CHL1O00533 RN7SL718P-201ENST00000581254 303 ntBASIC16.75■□□□□ 0.27
CHL1O00533 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.75■□□□□ 0.27
CHL1O00533 BX322562.1-201ENST00000617004 561 ntBASIC16.75■□□□□ 0.27
CHL1O00533 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC16.75■□□□□ 0.27
CHL1O00533 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC16.75■□□□□ 0.27
CHL1O00533 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC16.75■□□□□ 0.27
CHL1O00533 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 AC133919.3-201ENST00000621407 1804 ntBASIC16.75■□□□□ 0.27
CHL1O00533 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHL1O00533 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC16.75■□□□□ 0.27
CHL1O00533 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC16.75■□□□□ 0.27
CHL1O00533 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHL1O00533 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CHL1O00533 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC16.74■□□□□ 0.27
CHL1O00533 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHL1O00533 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC16.74■□□□□ 0.27
CHL1O00533 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHL1O00533 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CHL1O00533 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHL1O00533 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CHL1O00533 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.74■□□□□ 0.27
CHL1O00533 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHL1O00533 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHL1O00533 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC16.74■□□□□ 0.27
CHL1O00533 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHL1O00533 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.74■□□□□ 0.27
CHL1O00533 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC16.74■□□□□ 0.27
CHL1O00533 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC16.74■□□□□ 0.27
CHL1O00533 RBMXP2-201ENST00000434705 1168 ntBASIC16.74■□□□□ 0.27
CHL1O00533 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC16.74■□□□□ 0.27
CHL1O00533 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC16.74■□□□□ 0.27
CHL1O00533 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.74■□□□□ 0.27
CHL1O00533 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.74■□□□□ 0.27
CHL1O00533 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC16.74■□□□□ 0.27
CHL1O00533 AL357143.1-203ENST00000639750 881 ntBASIC16.74■□□□□ 0.27
CHL1O00533 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.74■□□□□ 0.27
CHL1O00533 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHL1O00533 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHL1O00533 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHL1O00533 AC027612.1-201ENST00000445234 2395 ntBASIC16.74■□□□□ 0.27
CHL1O00533 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHL1O00533 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.74■□□□□ 0.27
CHL1O00533 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC16.74■□□□□ 0.27
CHL1O00533 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC16.74■□□□□ 0.27
CHL1O00533 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHL1O00533 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.74■□□□□ 0.27
CHL1O00533 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC16.74■□□□□ 0.27
CHL1O00533 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC16.74■□□□□ 0.27
CHL1O00533 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC16.73■□□□□ 0.27
CHL1O00533 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHL1O00533 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHL1O00533 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CHL1O00533 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC16.73■□□□□ 0.27
CHL1O00533 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHL1O00533 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.73■□□□□ 0.27
CHL1O00533 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHL1O00533 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHL1O00533 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHL1O00533 CD9-212ENST00000610354 1315 ntTSL 5 BASIC16.73■□□□□ 0.27
CHL1O00533 AC109326.1-201ENST00000624705 1321 ntBASIC16.73■□□□□ 0.27
CHL1O00533 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC16.73■□□□□ 0.27
CHL1O00533 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHL1O00533 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHL1O00533 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHL1O00533 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHL1O00533 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms