Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LCP1P13796 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LCP1P13796 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LCP1P13796 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LCP1P13796 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LCP1P13796 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LCP1P13796 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LCP1P13796 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.98□□□□□ -0.17
LCP1P13796 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LCP1P13796 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LCP1P13796 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC13.98□□□□□ -0.17
LCP1P13796 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC13.98□□□□□ -0.17
LCP1P13796 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LCP1P13796 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
LCP1P13796 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.98□□□□□ -0.17
LCP1P13796 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 MKRN7P-201ENST00000433469 1371 ntBASIC13.97□□□□□ -0.17
LCP1P13796 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LCP1P13796 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.97□□□□□ -0.17
LCP1P13796 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC13.97□□□□□ -0.17
LCP1P13796 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 AC244154.1-201ENST00000620148 1555 ntBASIC13.97□□□□□ -0.17
LCP1P13796 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC13.97□□□□□ -0.17
LCP1P13796 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LCP1P13796 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 GGT8P-201ENST00000418938 532 ntBASIC13.97□□□□□ -0.17
LCP1P13796 OR51A9P-201ENST00000422578 911 ntBASIC13.97□□□□□ -0.17
LCP1P13796 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LCP1P13796 RPSAP12-201ENST00000435879 888 ntBASIC13.97□□□□□ -0.17
LCP1P13796 AC063952.3-201ENST00000467756 308 ntBASIC13.97□□□□□ -0.17
LCP1P13796 AL157792.1-201ENST00000488281 530 ntBASIC13.97□□□□□ -0.17
LCP1P13796 RN7SL288P-201ENST00000490496 291 ntBASIC13.97□□□□□ -0.17
LCP1P13796 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.97□□□□□ -0.17
LCP1P13796 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC13.97□□□□□ -0.17
LCP1P13796 SRPK2P-201ENST00000523408 1100 ntBASIC13.97□□□□□ -0.17
LCP1P13796 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 AC091304.3-201ENST00000566500 716 ntBASIC13.97□□□□□ -0.17
LCP1P13796 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC13.97□□□□□ -0.17
LCP1P13796 AC012146.4-201ENST00000575546 271 ntBASIC13.97□□□□□ -0.17
LCP1P13796 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.97□□□□□ -0.17
LCP1P13796 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.97□□□□□ -0.17
LCP1P13796 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.97□□□□□ -0.17
LCP1P13796 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 AC006144.1-201ENST00000424220 1600 ntBASIC13.97□□□□□ -0.17
LCP1P13796 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 AC018445.4-201ENST00000624066 2291 ntBASIC13.97□□□□□ -0.17
LCP1P13796 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCP1P13796 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LCP1P13796 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.96□□□□□ -0.17
LCP1P13796 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCP1P13796 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCP1P13796 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCP1P13796 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.96□□□□□ -0.17
LCP1P13796 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCP1P13796 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LCP1P13796 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCP1P13796 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.96□□□□□ -0.17
LCP1P13796 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCP1P13796 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LCP1P13796 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC13.96□□□□□ -0.17
LCP1P13796 LINC02228-202ENST00000641261 2489 ntBASIC13.96□□□□□ -0.17
LCP1P13796 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LCP1P13796 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCP1P13796 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC13.96□□□□□ -0.17
LCP1P13796 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCP1P13796 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
LCP1P13796 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LCP1P13796 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCP1P13796 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LCP1P13796 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms