Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC1A1P43005 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SLC1A1P43005 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.9□□□□□ -0.18
SLC1A1P43005 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SLC1A1P43005 AC026316.1-201ENST00000398900 414 ntBASIC13.9□□□□□ -0.18
SLC1A1P43005 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC13.9□□□□□ -0.18
SLC1A1P43005 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.9□□□□□ -0.18
SLC1A1P43005 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 DPY19L2P5-201ENST00000456300 331 ntBASIC13.9□□□□□ -0.18
SLC1A1P43005 AK2-208ENST00000487289 920 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.9□□□□□ -0.18
SLC1A1P43005 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.9□□□□□ -0.18
SLC1A1P43005 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.9□□□□□ -0.18
SLC1A1P43005 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.9□□□□□ -0.18
SLC1A1P43005 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.9□□□□□ -0.18
SLC1A1P43005 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.9□□□□□ -0.18
SLC1A1P43005 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.9□□□□□ -0.18
SLC1A1P43005 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SLC1A1P43005 AC103691.2-201ENST00000618824 433 ntBASIC13.9□□□□□ -0.18
SLC1A1P43005 KRT8P25-201ENST00000473150 1456 ntBASIC13.9□□□□□ -0.18
SLC1A1P43005 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC1A1P43005 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SLC1A1P43005 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 AC010336.1-201ENST00000539278 4739 ntBASIC13.9□□□□□ -0.18
SLC1A1P43005 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC1A1P43005 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SLC1A1P43005 AL157832.2-205ENST00000597245 1649 ntBASIC13.9□□□□□ -0.19
SLC1A1P43005 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13.9□□□□□ -0.19
SLC1A1P43005 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
SLC1A1P43005 AC074138.1-201ENST00000611182 1303 ntBASIC13.9□□□□□ -0.19
SLC1A1P43005 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLC1A1P43005 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 AC244154.1-201ENST00000620148 1555 ntBASIC13.89□□□□□ -0.19
SLC1A1P43005 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 BAK1P1-201ENST00000317045 636 ntBASIC13.89□□□□□ -0.19
SLC1A1P43005 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC1A1P43005 OR2T32P-201ENST00000403423 963 ntBASIC13.89□□□□□ -0.19
SLC1A1P43005 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLC1A1P43005 AL354861.1-201ENST00000445213 355 ntBASIC13.89□□□□□ -0.19
SLC1A1P43005 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 IMP3P2-201ENST00000489760 475 ntBASIC13.89□□□□□ -0.19
SLC1A1P43005 AC012158.2-201ENST00000536546 354 ntBASIC13.89□□□□□ -0.19
SLC1A1P43005 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC1A1P43005 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.89□□□□□ -0.19
SLC1A1P43005 CES1P2-201ENST00000566467 1242 ntBASIC13.89□□□□□ -0.19
SLC1A1P43005 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC1A1P43005 MIR3907-201ENST00000579424 151 ntBASIC13.89□□□□□ -0.19
SLC1A1P43005 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC1A1P43005 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC1A1P43005 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SLC1A1P43005 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC1A1P43005 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms