Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 FLJ30679-201ENST00000624773 1980 ntBASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.36□□□□□ -0.43
POLR2J2Q9GZM3 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 MIR1247-201ENST00000408206 136 ntBASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 AL592076.1-201ENST00000424448 303 ntBASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 STK24P1-201ENST00000455035 1291 ntBASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 AC025186.1-201ENST00000478174 870 ntBASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 RN7SL564P-201ENST00000496309 250 ntBASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 OR5BD1P-201ENST00000532527 817 ntBASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC12.35□□□□□ -0.43
POLR2J2Q9GZM3 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 KCTD21-AS1-207ENST00000600795 1549 ntBASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
POLR2J2Q9GZM3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms