Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC12.63□□□□□ -0.39
SCN2BO60939 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.63□□□□□ -0.39
SCN2BO60939 KRT18P62-201ENST00000446618 1287 ntBASIC12.63□□□□□ -0.39
SCN2BO60939 GULOP-201ENST00000454030 748 ntBASIC12.63□□□□□ -0.39
SCN2BO60939 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
SCN2BO60939 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.63□□□□□ -0.39
SCN2BO60939 HERC2P11-201ENST00000562845 725 ntBASIC12.63□□□□□ -0.39
SCN2BO60939 AC100756.2-201ENST00000569537 736 ntBASIC12.63□□□□□ -0.39
SCN2BO60939 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.63□□□□□ -0.39
SCN2BO60939 AC007952.4-201ENST00000573866 637 ntBASIC12.63□□□□□ -0.39
SCN2BO60939 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.63□□□□□ -0.39
SCN2BO60939 AC103810.3-201ENST00000583567 96 ntBASIC12.63□□□□□ -0.39
SCN2BO60939 AP001120.3-201ENST00000585729 489 ntBASIC12.63□□□□□ -0.39
SCN2BO60939 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 AC097724.1-201ENST00000609581 426 ntBASIC12.63□□□□□ -0.39
SCN2BO60939 MIR6787-201ENST00000616675 61 ntBASIC12.63□□□□□ -0.39
SCN2BO60939 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SCN2BO60939 DDX11L2-201ENST00000437401 1398 ntBASIC12.63□□□□□ -0.39
SCN2BO60939 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SCN2BO60939 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SCN2BO60939 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC12.63□□□□□ -0.39
SCN2BO60939 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.63□□□□□ -0.39
SCN2BO60939 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.63□□□□□ -0.39
SCN2BO60939 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SCN2BO60939 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.63□□□□□ -0.39
SCN2BO60939 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SCN2BO60939 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC12.62□□□□□ -0.39
SCN2BO60939 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SCN2BO60939 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SCN2BO60939 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
SCN2BO60939 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.62□□□□□ -0.39
SCN2BO60939 AC007274.2-201ENST00000421675 662 ntBASIC12.62□□□□□ -0.39
SCN2BO60939 RPE-208ENST00000436630 1128 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 AL133466.1-201ENST00000447582 150 ntBASIC12.62□□□□□ -0.39
SCN2BO60939 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.62□□□□□ -0.39
SCN2BO60939 CHMP4BP1-201ENST00000556017 588 ntBASIC12.62□□□□□ -0.39
SCN2BO60939 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.62□□□□□ -0.39
SCN2BO60939 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SCN2BO60939 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.62□□□□□ -0.39
SCN2BO60939 AC005632.3-201ENST00000605544 308 ntBASIC12.62□□□□□ -0.39
SCN2BO60939 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.62□□□□□ -0.39
SCN2BO60939 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SCN2BO60939 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SCN2BO60939 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.62□□□□□ -0.39
SCN2BO60939 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms