Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 AC013553.1-201ENST00000560906 267 ntBASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 AL136982.5-201ENST00000605222 294 ntBASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 MKRN5P-201ENST00000445263 1467 ntBASIC12.02□□□□□ -0.49
PARPBPQ9NWS1 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 IGHV3-37-201ENST00000518544 340 ntBASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 AC010976.2-201ENST00000609697 852 ntBASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 AC012531.1-201ENST00000562848 2680 ntBASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.01□□□□□ -0.49
PARPBPQ9NWS1 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms