Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.65□□□□□ -0.38
CLK1P49759 AC132825.4-202ENST00000578792 434 ntBASIC12.65□□□□□ -0.38
CLK1P49759 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.65□□□□□ -0.38
CLK1P49759 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
CLK1P49759 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.65□□□□□ -0.38
CLK1P49759 AC009560.1-201ENST00000620208 434 ntBASIC12.65□□□□□ -0.38
CLK1P49759 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.65□□□□□ -0.38
CLK1P49759 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.65□□□□□ -0.38
CLK1P49759 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CLK1P49759 AL391294.1-201ENST00000641352 4068 ntBASIC12.65□□□□□ -0.38
CLK1P49759 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC12.65□□□□□ -0.38
CLK1P49759 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 ZNF493-208ENST00000599461 1769 ntBASIC12.65□□□□□ -0.38
CLK1P49759 AC007614.5-201ENST00000623424 8892 ntBASIC12.65□□□□□ -0.38
CLK1P49759 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.65□□□□□ -0.38
CLK1P49759 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
CLK1P49759 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.65□□□□□ -0.38
CLK1P49759 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.65□□□□□ -0.38
CLK1P49759 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 KRT8P43-201ENST00000406052 1458 ntBASIC12.65□□□□□ -0.38
CLK1P49759 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLK1P49759 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLK1P49759 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
CLK1P49759 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 TEKT4P2-202ENST00000559466 1312 ntBASIC12.64□□□□□ -0.39
CLK1P49759 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CLK1P49759 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC12.64□□□□□ -0.39
CLK1P49759 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 AC008764.8-201ENST00000623966 2717 ntBASIC12.64□□□□□ -0.39
CLK1P49759 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
CLK1P49759 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CLK1P49759 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 MIR557-201ENST00000385239 98 ntBASIC12.64□□□□□ -0.39
CLK1P49759 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CLK1P49759 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.64□□□□□ -0.39
CLK1P49759 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.64□□□□□ -0.39
CLK1P49759 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 AP000358.1-201ENST00000456260 156 ntBASIC12.64□□□□□ -0.39
CLK1P49759 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.64□□□□□ -0.39
CLK1P49759 NUP210P1-202ENST00000504322 710 ntBASIC12.64□□□□□ -0.39
CLK1P49759 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.64□□□□□ -0.39
CLK1P49759 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.64□□□□□ -0.39
CLK1P49759 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.64□□□□□ -0.39
CLK1P49759 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
CLK1P49759 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.64□□□□□ -0.39
CLK1P49759 AC006453.1-201ENST00000636037 1257 ntBASIC12.64□□□□□ -0.39
CLK1P49759 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.64□□□□□ -0.39
CLK1P49759 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC12.64□□□□□ -0.39
CLK1P49759 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CLK1P49759 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLK1P49759 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.63□□□□□ -0.39
CLK1P49759 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.63□□□□□ -0.39
CLK1P49759 CTAGE10P-201ENST00000318353 2408 ntBASIC12.63□□□□□ -0.39
CLK1P49759 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms