Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.9□□□□□ -0.5
APOC1P02654 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
APOC1P02654 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
APOC1P02654 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 PYY2-201ENST00000315776 282 ntBASIC11.9□□□□□ -0.5
APOC1P02654 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
APOC1P02654 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC11.9□□□□□ -0.5
APOC1P02654 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 PFN2-202ENST00000423691 911 ntTSL 2 BASIC11.9□□□□□ -0.5
APOC1P02654 CALR4P-201ENST00000431943 946 ntBASIC11.9□□□□□ -0.5
APOC1P02654 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC11.9□□□□□ -0.5
APOC1P02654 ERP29P1-201ENST00000442902 706 ntBASIC11.9□□□□□ -0.5
APOC1P02654 AL133466.1-201ENST00000447582 150 ntBASIC11.9□□□□□ -0.5
APOC1P02654 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC11.9□□□□□ -0.5
APOC1P02654 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
APOC1P02654 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC11.9□□□□□ -0.5
APOC1P02654 RTN3P1-201ENST00000536295 711 ntBASIC11.9□□□□□ -0.5
APOC1P02654 NAA40-205ENST00000539656 577 ntTSL 4 BASIC11.9□□□□□ -0.5
APOC1P02654 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
APOC1P02654 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC11.9□□□□□ -0.5
APOC1P02654 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC11.9□□□□□ -0.5
APOC1P02654 MIR4538-201ENST00000581377 78 ntBASIC11.9□□□□□ -0.5
APOC1P02654 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC11.9□□□□□ -0.5
APOC1P02654 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
APOC1P02654 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
APOC1P02654 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC11.9□□□□□ -0.5
APOC1P02654 AP001505.2-201ENST00000616815 443 ntBASIC11.9□□□□□ -0.5
APOC1P02654 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
APOC1P02654 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
APOC1P02654 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
APOC1P02654 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 DDO-201ENST00000368923 1953 ntTSL 2 BASIC11.9□□□□□ -0.5
APOC1P02654 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 RBM22P2-201ENST00000393978 1814 ntBASIC11.9□□□□□ -0.5
APOC1P02654 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC1P02654 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC11.9□□□□□ -0.51
APOC1P02654 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
APOC1P02654 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.9□□□□□ -0.51
APOC1P02654 HSPA8P9-201ENST00000485881 1943 ntBASIC11.9□□□□□ -0.51
APOC1P02654 GUCY2EP-203ENST00000531117 1918 ntBASIC11.9□□□□□ -0.51
APOC1P02654 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
APOC1P02654 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
APOC1P02654 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
APOC1P02654 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC11.89□□□□□ -0.51
APOC1P02654 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC1P02654 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
APOC1P02654 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 TBC1D3J-201ENST00000620719 1426 ntBASIC11.89□□□□□ -0.51
APOC1P02654 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
APOC1P02654 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 SSR4-202ENST00000370085 526 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC1P02654 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
APOC1P02654 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC1P02654 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC11.89□□□□□ -0.51
APOC1P02654 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC11.89□□□□□ -0.51
APOC1P02654 REEP1-202ENST00000453231 940 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC1P02654 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 HIST2H2BC-201ENST00000498492 580 ntBASIC11.89□□□□□ -0.51
APOC1P02654 PRSS3P1-201ENST00000503996 742 ntBASIC11.89□□□□□ -0.51
APOC1P02654 AC093300.1-201ENST00000510368 1201 ntBASIC11.89□□□□□ -0.51
APOC1P02654 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOC1P02654 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
APOC1P02654 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC1P02654 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC1P02654 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC11.89□□□□□ -0.51
APOC1P02654 MIR3677-201ENST00000578964 60 ntBASIC11.89□□□□□ -0.51
APOC1P02654 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC11.89□□□□□ -0.51
APOC1P02654 AP001462.1-201ENST00000594089 452 ntBASIC11.89□□□□□ -0.51
APOC1P02654 AC009145.4-201ENST00000625119 1294 ntBASIC11.89□□□□□ -0.51
APOC1P02654 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 AC026797.1-201ENST00000624837 2869 ntBASIC11.89□□□□□ -0.51
APOC1P02654 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC1P02654 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOC1P02654 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOC1P02654 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms