Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.93□□□□□ -0.5
ZIC3O60481 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC11.93□□□□□ -0.5
ZIC3O60481 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC11.93□□□□□ -0.5
ZIC3O60481 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
ZIC3O60481 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.93□□□□□ -0.5
ZIC3O60481 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 MIPEPP1-201ENST00000413533 2027 ntBASIC11.93□□□□□ -0.5
ZIC3O60481 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 LILRP2-202ENST00000413572 1383 ntBASIC11.92□□□□□ -0.5
ZIC3O60481 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC11.92□□□□□ -0.5
ZIC3O60481 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ZIC3O60481 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 AC124319.4-201ENST00000622931 2161 ntBASIC11.92□□□□□ -0.5
ZIC3O60481 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ZIC3O60481 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC11.92□□□□□ -0.5
ZIC3O60481 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
ZIC3O60481 AHCYP7-201ENST00000560847 1308 ntBASIC11.92□□□□□ -0.5
ZIC3O60481 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.92□□□□□ -0.5
ZIC3O60481 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC11.92□□□□□ -0.5
ZIC3O60481 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ZIC3O60481 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
ZIC3O60481 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC11.92□□□□□ -0.5
ZIC3O60481 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC11.92□□□□□ -0.5
ZIC3O60481 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 RNU1-80P-201ENST00000459500 161 ntBASIC11.92□□□□□ -0.5
ZIC3O60481 AC010234.1-201ENST00000494599 870 ntBASIC11.92□□□□□ -0.5
ZIC3O60481 RBM4-207ENST00000506523 654 ntTSL 3 BASIC11.92□□□□□ -0.5
ZIC3O60481 AC114812.4-201ENST00000506676 757 ntBASIC11.92□□□□□ -0.5
ZIC3O60481 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC11.92□□□□□ -0.5
ZIC3O60481 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC11.92□□□□□ -0.5
ZIC3O60481 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 AC023051.2-201ENST00000541141 460 ntBASIC11.92□□□□□ -0.5
ZIC3O60481 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC11.92□□□□□ -0.5
ZIC3O60481 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC11.92□□□□□ -0.5
ZIC3O60481 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC11.92□□□□□ -0.5
ZIC3O60481 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC11.92□□□□□ -0.5
ZIC3O60481 AC117500.5-201ENST00000623233 527 ntBASIC11.92□□□□□ -0.5
ZIC3O60481 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC11.92□□□□□ -0.5
ZIC3O60481 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.92□□□□□ -0.5
ZIC3O60481 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.92□□□□□ -0.5
ZIC3O60481 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.92□□□□□ -0.5
ZIC3O60481 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ZIC3O60481 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 AL118506.1-201ENST00000601296 3082 ntBASIC11.92□□□□□ -0.5
ZIC3O60481 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ZIC3O60481 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZIC3O60481 ATF4P4-201ENST00000393544 1930 ntBASIC11.92□□□□□ -0.5
ZIC3O60481 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ZIC3O60481 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.91□□□□□ -0.5
ZIC3O60481 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC11.91□□□□□ -0.5
ZIC3O60481 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms