Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 IMP3P2-201ENST00000489760 475 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 SRP19-206ENST00000515463 660 ntTSL 3 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 RTN3P1-201ENST00000536295 711 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 AL109837.1-201ENST00000603272 613 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 AC005696.4-201ENST00000614400 3147 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 CTAGE7P-201ENST00000435712 2436 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 GBP1P1-201ENST00000394662 1740 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 PCDHGB8P-202ENST00000507007 2873 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 FAM90A2P-201ENST00000511144 1395 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 FAM90A25P-201ENST00000528404 1395 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 STRCP1-201ENST00000509801 5328 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 AC010536.1-201ENST00000538868 2611 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 AC009533.1-201ENST00000539757 3158 ntBASIC12.53□□□□□ -0.4
AMBRA1Q9C0C7 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AMBRA1Q9C0C7 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AMBRA1Q9C0C7 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.52□□□□□ -0.4
AMBRA1Q9C0C7 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC12.52□□□□□ -0.4
AMBRA1Q9C0C7 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AMBRA1Q9C0C7 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
AMBRA1Q9C0C7 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
AMBRA1Q9C0C7 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.52□□□□□ -0.4
AMBRA1Q9C0C7 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AMBRA1Q9C0C7 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AMBRA1Q9C0C7 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AMBRA1Q9C0C7 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 AC026320.2-201ENST00000434379 478 ntBASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 AC114947.1-202ENST00000514136 344 ntBASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 FGFR3P5-201ENST00000564496 886 ntBASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 RN7SL665P-201ENST00000578793 300 ntBASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 AC010503.4-201ENST00000615487 688 ntBASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.52□□□□□ -0.41
AMBRA1Q9C0C7 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms