Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 AC011471.3-201ENST00000623576 402 ntBASIC14.16□□□□□ -0.14
LMO3Q8TAP4 AL451007.2-201ENST00000632004 563 ntBASIC14.16□□□□□ -0.14
LMO3Q8TAP4 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 PES1-205ENST00000405677 2708 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 SPRYD3-204ENST00000547837 1655 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 USB1-207ENST00000563149 1751 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 AHCYP7-201ENST00000560847 1308 ntBASIC14.15□□□□□ -0.14
LMO3Q8TAP4 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 AC126335.2-201ENST00000623362 4637 ntBASIC14.15□□□□□ -0.14
LMO3Q8TAP4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 COQ4-202ENST00000372875 928 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 RPSAP12-201ENST00000435879 888 ntBASIC14.15□□□□□ -0.14
LMO3Q8TAP4 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 TREHP1-201ENST00000531328 465 ntBASIC14.15□□□□□ -0.14
LMO3Q8TAP4 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 PHBP18-201ENST00000546648 813 ntBASIC14.15□□□□□ -0.14
LMO3Q8TAP4 MIR5196-201ENST00000578146 115 ntBASIC14.15□□□□□ -0.14
LMO3Q8TAP4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO3Q8TAP4 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LMO3Q8TAP4 IYD-208ENST00000500320 2158 ntTSL 2 BASIC14.15□□□□□ -0.15
LMO3Q8TAP4 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms