Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDE6BP35913 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC16.2■□□□□ 0.18
PDE6BP35913 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PDE6BP35913 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.19■□□□□ 0.18
PDE6BP35913 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.19■□□□□ 0.18
PDE6BP35913 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 DDX6P2-201ENST00000619520 1455 ntBASIC16.19■□□□□ 0.18
PDE6BP35913 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC16.19■□□□□ 0.18
PDE6BP35913 PARK7-204ENST00000377493 795 ntTSL 2 BASIC16.19■□□□□ 0.18
PDE6BP35913 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 HNRNPABP1-201ENST00000406003 734 ntBASIC16.19■□□□□ 0.18
PDE6BP35913 AL133517.1-201ENST00000413412 748 ntBASIC16.19■□□□□ 0.18
PDE6BP35913 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC16.19■□□□□ 0.18
PDE6BP35913 AC067942.2-201ENST00000506227 1268 ntBASIC16.19■□□□□ 0.18
PDE6BP35913 RPL30-213ENST00000523172 274 ntTSL 5 BASIC16.19■□□□□ 0.18
PDE6BP35913 AC080023.2-201ENST00000532615 208 ntBASIC16.19■□□□□ 0.18
PDE6BP35913 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC16.19■□□□□ 0.18
PDE6BP35913 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC16.19■□□□□ 0.18
PDE6BP35913 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC16.19■□□□□ 0.18
PDE6BP35913 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PDE6BP35913 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC16.19■□□□□ 0.18
PDE6BP35913 AC087893.1-201ENST00000612818 664 ntBASIC16.19■□□□□ 0.18
PDE6BP35913 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PDE6BP35913 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
PDE6BP35913 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.19■□□□□ 0.18
PDE6BP35913 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PDE6BP35913 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PDE6BP35913 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PDE6BP35913 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PDE6BP35913 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PDE6BP35913 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PDE6BP35913 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PDE6BP35913 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDE6BP35913 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.18■□□□□ 0.18
PDE6BP35913 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.18■□□□□ 0.18
PDE6BP35913 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC16.18■□□□□ 0.18
PDE6BP35913 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.18■□□□□ 0.18
PDE6BP35913 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.18■□□□□ 0.18
PDE6BP35913 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 FAM86FP-201ENST00000338711 969 ntBASIC16.18■□□□□ 0.18
PDE6BP35913 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PDE6BP35913 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDE6BP35913 AL049597.1-201ENST00000447415 555 ntBASIC16.18■□□□□ 0.18
PDE6BP35913 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC16.18■□□□□ 0.18
PDE6BP35913 MTND6P4-201ENST00000506002 522 ntBASIC16.18■□□□□ 0.18
PDE6BP35913 OR5BA1P-201ENST00000529722 982 ntBASIC16.18■□□□□ 0.18
PDE6BP35913 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC16.18■□□□□ 0.18
PDE6BP35913 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC16.18■□□□□ 0.18
PDE6BP35913 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC16.18■□□□□ 0.18
PDE6BP35913 MIR378I-201ENST00000582688 76 ntBASIC16.18■□□□□ 0.18
PDE6BP35913 U62317.4-201ENST00000609758 448 ntBASIC16.18■□□□□ 0.18
PDE6BP35913 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC16.18■□□□□ 0.18
PDE6BP35913 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PDE6BP35913 AC009093.9-201ENST00000566038 1611 ntBASIC16.18■□□□□ 0.18
PDE6BP35913 ACVR1C-202ENST00000335450 1501 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PDE6BP35913 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDE6BP35913 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.17■□□□□ 0.18
PDE6BP35913 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PDE6BP35913 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
PDE6BP35913 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC16.17■□□□□ 0.18
PDE6BP35913 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms