Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KRT8P25-201ENST00000473150 1456 ntBASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NPIPA3F8WFD2 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 AC064850.1-201ENST00000413279 1398 ntBASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 PI4KAP2-201ENST00000360806 2080 ntBASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 OR7E155P-201ENST00000412208 1014 ntBASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 AC092570.1-201ENST00000414446 469 ntBASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 FAU-202ENST00000434372 533 ntTSL 2 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 AC024075.2-201ENST00000598112 1473 ntBASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
NPIPA3F8WFD2 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 AC012531.1-201ENST00000562848 2680 ntBASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 IFNWP2-201ENST00000431203 580 ntBASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 RPSAP12-201ENST00000435879 888 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms