Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 HLA-DMA-202ENST00000395303 1007 ntBASIC14.19□□□□□ -0.14
LMO3Q8TAP4 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 AC104784.1-201ENST00000473096 294 ntBASIC14.19□□□□□ -0.14
LMO3Q8TAP4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 FAM90A17P-201ENST00000533716 1957 ntBASIC14.19□□□□□ -0.14
LMO3Q8TAP4 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 AC133919.3-201ENST00000621407 1804 ntBASIC14.18□□□□□ -0.14
LMO3Q8TAP4 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 ZNF877P-201ENST00000437614 612 ntBASIC14.18□□□□□ -0.14
LMO3Q8TAP4 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 AC008267.1-201ENST00000474858 1069 ntBASIC14.18□□□□□ -0.14
LMO3Q8TAP4 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 RNA5SP420-201ENST00000516997 137 ntBASIC14.18□□□□□ -0.14
LMO3Q8TAP4 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 FAM86B3P-203ENST00000523992 854 ntBASIC14.18□□□□□ -0.14
LMO3Q8TAP4 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 AL353622.2-201ENST00000605846 425 ntBASIC14.18□□□□□ -0.14
LMO3Q8TAP4 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms