Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL133466.1-201ENST00000447582 150 ntBASIC12.7□□□□□ -0.38
CLK1P49759 AC012618.1-201ENST00000461223 412 ntBASIC12.7□□□□□ -0.38
CLK1P49759 SLC25A15P3-201ENST00000505530 290 ntBASIC12.7□□□□□ -0.38
CLK1P49759 ALG1L13P-202ENST00000519320 584 ntBASIC12.7□□□□□ -0.38
CLK1P49759 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CLK1P49759 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.7□□□□□ -0.38
CLK1P49759 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLK1P49759 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CLK1P49759 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.7□□□□□ -0.38
CLK1P49759 AP001505.2-201ENST00000616815 443 ntBASIC12.7□□□□□ -0.38
CLK1P49759 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLK1P49759 AL133338.1-201ENST00000565695 1517 ntBASIC12.7□□□□□ -0.38
CLK1P49759 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLK1P49759 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CLK1P49759 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLK1P49759 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.7□□□□□ -0.38
CLK1P49759 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.7□□□□□ -0.38
CLK1P49759 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.7□□□□□ -0.38
CLK1P49759 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLK1P49759 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.7□□□□□ -0.38
CLK1P49759 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLK1P49759 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.7□□□□□ -0.38
CLK1P49759 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.7□□□□□ -0.38
CLK1P49759 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.7□□□□□ -0.38
CLK1P49759 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.7□□□□□ -0.38
CLK1P49759 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLK1P49759 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLK1P49759 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLK1P49759 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLK1P49759 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
CLK1P49759 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
CLK1P49759 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 HERC2P9-206ENST00000529624 5187 ntBASIC12.69□□□□□ -0.38
CLK1P49759 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CLK1P49759 AC092123.2-201ENST00000611189 5421 ntBASIC12.69□□□□□ -0.38
CLK1P49759 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 MARK2P16-201ENST00000605714 1723 ntBASIC12.69□□□□□ -0.38
CLK1P49759 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.69□□□□□ -0.38
CLK1P49759 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.69□□□□□ -0.38
CLK1P49759 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.69□□□□□ -0.38
CLK1P49759 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.69□□□□□ -0.38
CLK1P49759 DUTP3-201ENST00000450025 415 ntBASIC12.69□□□□□ -0.38
CLK1P49759 AC073150.1-201ENST00000450406 1084 ntBASIC12.69□□□□□ -0.38
CLK1P49759 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CLK1P49759 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.69□□□□□ -0.38
CLK1P49759 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.69□□□□□ -0.38
CLK1P49759 AC026803.1-201ENST00000569130 274 ntBASIC12.69□□□□□ -0.38
CLK1P49759 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.69□□□□□ -0.38
CLK1P49759 MIR4754-201ENST00000582477 89 ntBASIC12.69□□□□□ -0.38
CLK1P49759 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CLK1P49759 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.69□□□□□ -0.38
CLK1P49759 AL133467.4-201ENST00000602953 725 ntBASIC12.69□□□□□ -0.38
CLK1P49759 AL353770.1-201ENST00000614915 403 ntBASIC12.69□□□□□ -0.38
CLK1P49759 CU633904.3-201ENST00000624042 1029 ntBASIC12.69□□□□□ -0.38
CLK1P49759 AC015967.2-201ENST00000624092 234 ntBASIC12.69□□□□□ -0.38
CLK1P49759 AC006435.4-201ENST00000625037 234 ntBASIC12.69□□□□□ -0.38
CLK1P49759 AL356737.1-201ENST00000634391 234 ntBASIC12.69□□□□□ -0.38
CLK1P49759 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CLK1P49759 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
CLK1P49759 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.69□□□□□ -0.38
CLK1P49759 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.69□□□□□ -0.38
CLK1P49759 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CLK1P49759 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLK1P49759 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms