Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1DP48730 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.32□□□□□ -0.28
CSNK1DP48730 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1DP48730 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CSNK1DP48730 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1DP48730 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1DP48730 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1DP48730 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1DP48730 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
CSNK1DP48730 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1DP48730 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CSNK1DP48730 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1DP48730 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CSNK1DP48730 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC13.32□□□□□ -0.28
CSNK1DP48730 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1DP48730 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1DP48730 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1DP48730 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CSNK1DP48730 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1DP48730 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1DP48730 LILRP2-202ENST00000413572 1383 ntBASIC13.32□□□□□ -0.28
CSNK1DP48730 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1DP48730 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 AC018445.4-201ENST00000624066 2291 ntBASIC13.31□□□□□ -0.28
CSNK1DP48730 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 PTGER4P2-201ENST00000328411 252 ntBASIC13.31□□□□□ -0.28
CSNK1DP48730 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 COX20P1-201ENST00000366529 357 ntBASIC13.31□□□□□ -0.28
CSNK1DP48730 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 PGAM1P11-201ENST00000416729 680 ntBASIC13.31□□□□□ -0.28
CSNK1DP48730 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC13.31□□□□□ -0.28
CSNK1DP48730 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC13.31□□□□□ -0.28
CSNK1DP48730 AC244197.1-201ENST00000456494 951 ntBASIC13.31□□□□□ -0.28
CSNK1DP48730 PTGER4P3-201ENST00000458150 252 ntBASIC13.31□□□□□ -0.28
CSNK1DP48730 GDNF-207ENST00000515058 764 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC13.31□□□□□ -0.28
CSNK1DP48730 AL022344.2-201ENST00000568976 968 ntBASIC13.31□□□□□ -0.28
CSNK1DP48730 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.31□□□□□ -0.28
CSNK1DP48730 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC13.31□□□□□ -0.28
CSNK1DP48730 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 PABPC1P2-201ENST00000471997 1805 ntBASIC13.31□□□□□ -0.28
CSNK1DP48730 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1DP48730 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC13.31□□□□□ -0.28
CSNK1DP48730 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1DP48730 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1DP48730 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1DP48730 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1DP48730 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1DP48730 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC13.3□□□□□ -0.28
CSNK1DP48730 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1DP48730 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CSNK1DP48730 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.3□□□□□ -0.28
CSNK1DP48730 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1DP48730 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.3□□□□□ -0.28
CSNK1DP48730 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1DP48730 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1DP48730 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CSNK1DP48730 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.3□□□□□ -0.28
CSNK1DP48730 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1DP48730 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CSNK1DP48730 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.3□□□□□ -0.28
CSNK1DP48730 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.3□□□□□ -0.28
CSNK1DP48730 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.3□□□□□ -0.28
CSNK1DP48730 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.3□□□□□ -0.28
CSNK1DP48730 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms