Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC14□□□□□ -0.17
SLC1A1P43005 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A1P43005 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SLC1A1P43005 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 AC015819.3-201ENST00000624305 2674 ntBASIC13.99□□□□□ -0.17
SLC1A1P43005 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
SLC1A1P43005 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC1A1P43005 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC1A1P43005 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC1A1P43005 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.99□□□□□ -0.17
SLC1A1P43005 RNA5SP417-201ENST00000516459 108 ntBASIC13.99□□□□□ -0.17
SLC1A1P43005 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC1A1P43005 SLC25A51P3-201ENST00000521814 889 ntBASIC13.99□□□□□ -0.17
SLC1A1P43005 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC1A1P43005 VENTXP3-201ENST00000546480 773 ntBASIC13.99□□□□□ -0.17
SLC1A1P43005 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC1A1P43005 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC13.99□□□□□ -0.17
SLC1A1P43005 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 AC140113.1-201ENST00000603467 169 ntBASIC13.99□□□□□ -0.17
SLC1A1P43005 AC087392.5-201ENST00000612517 489 ntBASIC13.99□□□□□ -0.17
SLC1A1P43005 MIR6799-201ENST00000620297 69 ntBASIC13.99□□□□□ -0.17
SLC1A1P43005 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SLC1A1P43005 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC1A1P43005 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A1P43005 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A1P43005 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SLC1A1P43005 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC1A1P43005 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC1A1P43005 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.98□□□□□ -0.17
SLC1A1P43005 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SLC1A1P43005 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
SLC1A1P43005 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.98□□□□□ -0.17
SLC1A1P43005 DTX2P1-201ENST00000425797 1633 ntBASIC13.98□□□□□ -0.17
SLC1A1P43005 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SLC1A1P43005 AC110048.1-201ENST00000604293 2157 ntBASIC13.98□□□□□ -0.17
SLC1A1P43005 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC1A1P43005 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SLC1A1P43005 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.98□□□□□ -0.17
SLC1A1P43005 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 GGT8P-201ENST00000418938 532 ntBASIC13.98□□□□□ -0.17
SLC1A1P43005 AC104212.2-201ENST00000478813 628 ntBASIC13.98□□□□□ -0.17
SLC1A1P43005 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.98□□□□□ -0.17
SLC1A1P43005 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC1A1P43005 AC007952.4-201ENST00000573866 637 ntBASIC13.98□□□□□ -0.17
SLC1A1P43005 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.98□□□□□ -0.17
SLC1A1P43005 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.98□□□□□ -0.17
SLC1A1P43005 RN7SL134P-201ENST00000579756 303 ntBASIC13.98□□□□□ -0.17
SLC1A1P43005 MFSD12-215ENST00000615613 688 ntBASIC13.98□□□□□ -0.17
SLC1A1P43005 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SLC1A1P43005 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
SLC1A1P43005 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.98□□□□□ -0.17
SLC1A1P43005 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms