Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CHTF8-201ENST00000306585 2561 ntBASIC15.29■□□□□ 0.04
CLCN1P35523 TNFSF13B-201ENST00000375887 2582 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 CNBD2-204ENST00000489667 2531 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 AC068775.1-201ENST00000322446 2142 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 SHMT1P1-201ENST00000419974 1312 ntBASIC15.28■□□□□ 0.04
CLCN1P35523 LINC00115-201ENST00000473798 1317 ntBASIC15.28■□□□□ 0.04
CLCN1P35523 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CLCN1P35523 ZNF300-203ENST00000418587 3226 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN1P35523 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 AC103592.1-201ENST00000394513 664 ntBASIC15.28■□□□□ 0.04
CLCN1P35523 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.28■□□□□ 0.04
CLCN1P35523 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.28■□□□□ 0.04
CLCN1P35523 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN1P35523 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN1P35523 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.28■□□□□ 0.04
CLCN1P35523 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN1P35523 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.28■□□□□ 0.04
CLCN1P35523 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.28■□□□□ 0.04
CLCN1P35523 RN7SL163P-201ENST00000583100 276 ntBASIC15.28■□□□□ 0.04
CLCN1P35523 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCN1P35523 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.28■□□□□ 0.04
CLCN1P35523 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.28■□□□□ 0.04
CLCN1P35523 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN1P35523 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLCN1P35523 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CLCN1P35523 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CLCN1P35523 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN1P35523 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.04
CLCN1P35523 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN1P35523 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN1P35523 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN1P35523 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN1P35523 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN1P35523 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN1P35523 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN1P35523 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN1P35523 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN1P35523 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN1P35523 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN1P35523 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN1P35523 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN1P35523 LINC01119-202ENST00000468141 2157 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN1P35523 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CLCN1P35523 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN1P35523 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN1P35523 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CLCN1P35523 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN1P35523 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.27■□□□□ 0.04
CLCN1P35523 HMGA1P1-201ENST00000415560 1062 ntBASIC15.27■□□□□ 0.04
CLCN1P35523 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN1P35523 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN1P35523 SEC63P1-201ENST00000425785 1258 ntBASIC15.27■□□□□ 0.04
CLCN1P35523 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN1P35523 AC078875.1-201ENST00000431907 724 ntBASIC15.27■□□□□ 0.04
CLCN1P35523 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN1P35523 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN1P35523 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN1P35523 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN1P35523 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
CLCN1P35523 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN1P35523 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CLCN1P35523 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN1P35523 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.27■□□□□ 0.04
CLCN1P35523 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN1P35523 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN1P35523 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.27■□□□□ 0.04
CLCN1P35523 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.27■□□□□ 0.04
CLCN1P35523 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN1P35523 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN1P35523 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN1P35523 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CLCN1P35523 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CLCN1P35523 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN1P35523 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
CLCN1P35523 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC15.27■□□□□ 0.03
CLCN1P35523 AL445647.1-201ENST00000606221 3599 ntBASIC15.27■□□□□ 0.03
CLCN1P35523 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC15.27■□□□□ 0.03
CLCN1P35523 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN1P35523 AC245140.2-201ENST00000624054 1939 ntBASIC15.27■□□□□ 0.03
CLCN1P35523 EXD2-206ENST00000409949 2688 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms