Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.22□□□□□ -0.45
P04436 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC12.22□□□□□ -0.45
P04436 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04436 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04436 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
P04436 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04436 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 LILRP2-202ENST00000413572 1383 ntBASIC12.21□□□□□ -0.45
P04436 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
P04436 RBM22P2-201ENST00000393978 1814 ntBASIC12.21□□□□□ -0.45
P04436 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P04436 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04436 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
P04436 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04436 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC12.21□□□□□ -0.45
P04436 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
P04436 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P04436 HNRNPA1P21-201ENST00000424115 961 ntBASIC12.21□□□□□ -0.45
P04436 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC12.21□□□□□ -0.45
P04436 KRT8P30-201ENST00000432100 650 ntBASIC12.21□□□□□ -0.45
P04436 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC12.21□□□□□ -0.45
P04436 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 RPL35P1-201ENST00000450819 370 ntBASIC12.21□□□□□ -0.45
P04436 KRT18P66-201ENST00000452970 1269 ntBASIC12.21□□□□□ -0.45
P04436 AK2-208ENST00000487289 920 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 CXXC1P1-202ENST00000489409 1212 ntBASIC12.21□□□□□ -0.45
P04436 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.21□□□□□ -0.45
P04436 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC12.21□□□□□ -0.45
P04436 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
P04436 ABHD17AP9-201ENST00000561925 548 ntBASIC12.21□□□□□ -0.45
P04436 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
P04436 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC12.21□□□□□ -0.45
P04436 AC244097.1-201ENST00000621631 1216 ntBASIC12.21□□□□□ -0.45
P04436 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC12.21□□□□□ -0.45
P04436 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC12.21□□□□□ -0.45
P04436 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
P04436 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04436 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
P04436 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
P04436 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
P04436 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04436 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
P04436 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
P04436 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P04436 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
P04436 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
P04436 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
P04436 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
P04436 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P04436 CICP9-201ENST00000444451 1913 ntBASIC12.21□□□□□ -0.46
P04436 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.21□□□□□ -0.46
P04436 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
P04436 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.21□□□□□ -0.46
P04436 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.21□□□□□ -0.46
P04436 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
P04436 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P04436 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.2□□□□□ -0.46
P04436 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC12.2□□□□□ -0.46
P04436 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC12.2□□□□□ -0.46
P04436 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
P04436 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
P04436 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.2□□□□□ -0.46
P04436 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 AL355102.3-201ENST00000554299 1678 ntBASIC12.2□□□□□ -0.46
P04436 Z98259.1-201ENST00000564261 1697 ntBASIC12.2□□□□□ -0.46
P04436 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
P04436 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.2□□□□□ -0.46
P04436 GH1-203ENST00000351388 685 ntTSL 2 BASIC12.2□□□□□ -0.46
P04436 HDGF-202ENST00000368206 960 ntTSL 5 BASIC12.2□□□□□ -0.46
P04436 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC12.2□□□□□ -0.46
P04436 OR10N1P-201ENST00000392758 869 ntBASIC12.2□□□□□ -0.46
P04436 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P04436 PHBP10-201ENST00000416467 784 ntBASIC12.2□□□□□ -0.46
P04436 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
P04436 IFNWP2-201ENST00000431203 580 ntBASIC12.2□□□□□ -0.46
P04436 ZNF877P-201ENST00000437614 612 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 279 ms