Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 PTN-202ENST00000393083 1599 ntTSL 5 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 PSAT1P2-201ENST00000426107 972 ntBASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 AC114501.1-201ENST00000445949 172 ntBASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 AL137779.3-201ENST00000553295 729 ntBASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 RN7SL134P-201ENST00000579756 303 ntBASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 AC107375.1-201ENST00000564464 2231 ntBASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 AC010970.1-201ENST00000445125 1848 ntBASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 AC005154.3-201ENST00000419639 1393 ntBASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 Z97985.1-201ENST00000332270 946 ntBASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 AC005777.1-201ENST00000588332 187 ntBASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 AL591926.3-201ENST00000611630 238 ntBASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 AC026336.4-201ENST00000624565 1050 ntBASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LYSMD3Q7Z3D4 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 BX324167.2-201ENST00000623717 3316 ntBASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
LYSMD3Q7Z3D4 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms