Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
KDELR3O43731 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KDELR3O43731 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
KDELR3O43731 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC13.51□□□□□ -0.25
KDELR3O43731 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
KDELR3O43731 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC13.51□□□□□ -0.25
KDELR3O43731 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC13.51□□□□□ -0.25
KDELR3O43731 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.51□□□□□ -0.25
KDELR3O43731 KRT17P4-201ENST00000429445 819 ntBASIC13.51□□□□□ -0.25
KDELR3O43731 BICD1P1-201ENST00000457832 1222 ntBASIC13.51□□□□□ -0.25
KDELR3O43731 AC025594.1-201ENST00000469533 543 ntBASIC13.51□□□□□ -0.25
KDELR3O43731 AC106047.2-201ENST00000511723 743 ntBASIC13.51□□□□□ -0.25
KDELR3O43731 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC13.51□□□□□ -0.25
KDELR3O43731 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC13.51□□□□□ -0.25
KDELR3O43731 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC13.51□□□□□ -0.25
KDELR3O43731 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC13.51□□□□□ -0.25
KDELR3O43731 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.51□□□□□ -0.25
KDELR3O43731 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC13.51□□□□□ -0.25
KDELR3O43731 HMGB1P24-201ENST00000611897 328 ntBASIC13.51□□□□□ -0.25
KDELR3O43731 AC244250.3-201ENST00000620749 366 ntBASIC13.51□□□□□ -0.25
KDELR3O43731 AC138466.4-201ENST00000623965 852 ntBASIC13.51□□□□□ -0.25
KDELR3O43731 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.51□□□□□ -0.25
KDELR3O43731 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC13.51□□□□□ -0.25
KDELR3O43731 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.51□□□□□ -0.25
KDELR3O43731 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
KDELR3O43731 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
KDELR3O43731 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
KDELR3O43731 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC13.5□□□□□ -0.25
KDELR3O43731 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.5□□□□□ -0.25
KDELR3O43731 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.5□□□□□ -0.25
KDELR3O43731 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.5□□□□□ -0.25
KDELR3O43731 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC13.5□□□□□ -0.25
KDELR3O43731 MIR566-201ENST00000385187 94 ntBASIC13.5□□□□□ -0.25
KDELR3O43731 AL355334.1-201ENST00000417713 215 ntBASIC13.5□□□□□ -0.25
KDELR3O43731 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.5□□□□□ -0.25
KDELR3O43731 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC13.5□□□□□ -0.25
KDELR3O43731 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
KDELR3O43731 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.5□□□□□ -0.25
KDELR3O43731 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.5□□□□□ -0.25
KDELR3O43731 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC13.5□□□□□ -0.25
KDELR3O43731 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC13.5□□□□□ -0.25
KDELR3O43731 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.5□□□□□ -0.25
KDELR3O43731 AC244097.1-201ENST00000621631 1216 ntBASIC13.5□□□□□ -0.25
KDELR3O43731 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.5□□□□□ -0.25
KDELR3O43731 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.5□□□□□ -0.25
KDELR3O43731 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
KDELR3O43731 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.5□□□□□ -0.25
KDELR3O43731 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.5□□□□□ -0.25
KDELR3O43731 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
KDELR3O43731 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
KDELR3O43731 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
KDELR3O43731 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.5□□□□□ -0.25
KDELR3O43731 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.5□□□□□ -0.25
KDELR3O43731 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC13.5□□□□□ -0.25
KDELR3O43731 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KDELR3O43731 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
KDELR3O43731 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDELR3O43731 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms