Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A1P43005 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A1P43005 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.03□□□□□ -0.16
SLC1A1P43005 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC1A1P43005 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A1P43005 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC1A1P43005 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC1A1P43005 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC1A1P43005 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC1A1P43005 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A1P43005 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 ZDHHC8P1-202ENST00000418264 1403 ntBASIC14.03□□□□□ -0.16
SLC1A1P43005 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A1P43005 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A1P43005 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A1P43005 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A1P43005 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 CTAGE13P-201ENST00000416709 2446 ntBASIC14.03□□□□□ -0.16
SLC1A1P43005 AC008806.1-201ENST00000624962 2443 ntBASIC14.03□□□□□ -0.16
SLC1A1P43005 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A1P43005 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SLC1A1P43005 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC14.02□□□□□ -0.16
SLC1A1P43005 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SLC1A1P43005 FAM90A17P-201ENST00000533716 1957 ntBASIC14.02□□□□□ -0.16
SLC1A1P43005 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC1A1P43005 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 USB1-207ENST00000563149 1751 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC1A1P43005 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
SLC1A1P43005 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC1A1P43005 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC1A1P43005 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC1A1P43005 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC1A1P43005 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.02□□□□□ -0.17
SLC1A1P43005 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 RN7SKP102-201ENST00000411186 315 ntBASIC14.02□□□□□ -0.17
SLC1A1P43005 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC1A1P43005 AC234782.1-201ENST00000451950 919 ntBASIC14.02□□□□□ -0.17
SLC1A1P43005 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC1A1P43005 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC1A1P43005 IGLV3-15-201ENST00000518356 244 ntBASIC14.02□□□□□ -0.17
SLC1A1P43005 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC1A1P43005 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC1A1P43005 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
SLC1A1P43005 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC1A1P43005 RN7SL556P-201ENST00000582856 298 ntBASIC14.02□□□□□ -0.17
SLC1A1P43005 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC1A1P43005 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC1A1P43005 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.02□□□□□ -0.17
SLC1A1P43005 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.02□□□□□ -0.17
SLC1A1P43005 GPR182-203ENST00000622922 591 ntBASIC14.02□□□□□ -0.17
SLC1A1P43005 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC1A1P43005 AC137723.2-201ENST00000623540 398 ntBASIC14.02□□□□□ -0.17
SLC1A1P43005 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
SLC1A1P43005 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SLC1A1P43005 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC1A1P43005 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC1A1P43005 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC1A1P43005 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC1A1P43005 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SLC1A1P43005 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SLC1A1P43005 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC1A1P43005 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms