Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 MIR3621-201ENST00000580529 85 ntBASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDHGB3Q9Y5G1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGB3Q9Y5G1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB3Q9Y5G1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB3Q9Y5G1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB3Q9Y5G1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB3Q9Y5G1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB3Q9Y5G1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB3Q9Y5G1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGB3Q9Y5G1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
PCDHGB3Q9Y5G1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGB3Q9Y5G1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHGB3Q9Y5G1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB3Q9Y5G1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 AL356740.2-201ENST00000601559 647 ntBASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 AL117332.1-201ENST00000622628 974 ntBASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB3Q9Y5G1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGB3Q9Y5G1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.89■□□□□ 0.94
PCDHGB3Q9Y5G1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB3Q9Y5G1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHGB3Q9Y5G1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB3Q9Y5G1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHGB3Q9Y5G1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHGB3Q9Y5G1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB3Q9Y5G1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB3Q9Y5G1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHGB3Q9Y5G1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHGB3Q9Y5G1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB3Q9Y5G1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDHGB3Q9Y5G1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB3Q9Y5G1 AC137767.1-201ENST00000602918 1920 ntBASIC20.88■□□□□ 0.93
PCDHGB3Q9Y5G1 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDHGB3Q9Y5G1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB3Q9Y5G1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDHGB3Q9Y5G1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHGB3Q9Y5G1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB3Q9Y5G1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB3Q9Y5G1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB3Q9Y5G1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB3Q9Y5G1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGB3Q9Y5G1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGB3Q9Y5G1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHGB3Q9Y5G1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB3Q9Y5G1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB3Q9Y5G1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB3Q9Y5G1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB3Q9Y5G1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB3Q9Y5G1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB3Q9Y5G1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB3Q9Y5G1 ESRRAP2-201ENST00000418437 1549 ntBASIC20.86■□□□□ 0.93
PCDHGB3Q9Y5G1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
PCDHGB3Q9Y5G1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB3Q9Y5G1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGB3Q9Y5G1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB3Q9Y5G1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PCDHGB3Q9Y5G1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms